RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TTC7BQ86TV6 843 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 ZNF687Q8N1G0 1237 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 OR13J1Q8NGT2 312 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 BRSK1Q8TDC3 778 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 MCMBPQ9BTE3 642 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 FOXQ1Q9C009 403 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 CAB39LQ9H9S4 337 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 PLLPQ9Y342 182 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 LDB2O43679 373 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 DHRS4L1P0CG22 281 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 COL9A1P20849 921 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 POLR2LP62875 67 aaKnown RBP18.47■□□□□ 0.55
SMPD1-208ENST00000533123 CTBP1Q13363 440 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 PTPRCAPQ14761 206 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 TSTD2Q5T7W7 516 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 GLT6D1Q7Z4J2 308 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 SCRN2Q96FV2 425 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 SHDQ96IW2 340 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 RANBP9Q96S59 729 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 RSPH9Q9H1X1 276 aaPredicted RBP18.47■□□□□ 0.55
SMPD1-208ENST00000533123 LMAN1LQ9HAT1 526 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 SLCO1B3Q9NPD5 702 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 MKS1Q9NXB0 559 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 KANSL1LA0AUZ9 987 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 MROH6A6NGR9 719 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 PLK4O00444 970 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 TIMP2P16035 220 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 GABRB3P28472 473 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 SPRP35270 261 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-208ENST00000533123 SATB1Q01826 763 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 KIAA0930Q6ICG6 404 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-208ENST00000533123 PARS2Q7L3T8 475 aaKnown RBP18.46■□□□□ 0.55
SMPD1-208ENST00000533123 ARRDC3Q96B67 414 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 MKRN2Q9H000 416 aaKnown RBP18.46■□□□□ 0.55
SMPD1-208ENST00000533123 MAGEE1Q9HCI5 957 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 LTB4R2Q9NPC1 389 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 SNX15Q9NRS6 342 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 MRPS17Q9Y2R5 130 aaKnown RBP18.46■□□□□ 0.55
SMPD1-208ENST00000533123 A0A1W2PQ67 120 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 NPIPB15A6NHN6 443 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-208ENST00000533123 SLC1A2P43004 574 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 COPAP53621 1224 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 ZNF470Q6ECI4 717 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 CGB2Q6NT52 195 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 CNTN4Q8IWV2 1026 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 PNPLA1Q8N8W4 532 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 ARMC2Q8NEN0 867 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 LRRC8CQ8TDW0 803 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 VPS39Q96JC1 886 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 NSRP1Q9H0G5 558 aaKnown RBP18.46■□□□□ 0.55
SMPD1-208ENST00000533123 SLC6A17Q9H1V8 727 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 YY1AP1Q9H869 796 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 DKK3Q9UBP4 350 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 PPIL1Q9Y3C6 166 aa18.46■□□□□ 0.55
SMPD1-208ENST00000533123 TSPAN11A1L157 253 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 CAPN8A6NHC0 703 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 FAM170BA6NMN3 283 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 C1QTNF3-AMACRE9PGA6 284 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 AHSGP02765 367 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 PAMP19021 973 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 ITGB7P26010 798 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 TYK2P29597 1187 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 CRHR1P34998 444 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 ARSDP51689 593 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 PGGT1BP53609 377 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 TMEM92Q6UXU6 159 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 USP45Q70EL2 814 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 LYSMD3Q7Z3D4 306 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 PIGWQ7Z7B1 504 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 TSPAN33Q86UF1 283 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 ZC3HC1Q86WB0 502 aaKnown RBP18.45■□□□□ 0.54
SMPD1-208ENST00000533123 OR2T3Q8NH03 318 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 ZNF75CPQ92670 426 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-208ENST00000533123 ZNF711Q9Y462 761 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 C1orf232A0A0U1RR37 186 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 UPK3BL1B0FP48 263 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 UPK3BL2E5RIL1 263 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 STK25O00506 426 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 RNASEH1O60930 286 aaKnown RBP18.45■□□□□ 0.54
SMPD1-208ENST00000533123 CRTAMO95727 393 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 SERPINB4P48594 390 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 CSE1LP55060 971 aaKnown RBP18.45■□□□□ 0.54
SMPD1-208ENST00000533123 TMPRSS15P98073 1019 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 FZD5Q13467 585 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 TAF1AQ15573 450 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-208ENST00000533123 CST6Q15828 149 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 EOGTQ5NDL2 527 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 RGS9BPQ6ZS82 235 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 CACNA2D3Q8IZS8 1091 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 FLCNQ8NFG4 579 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 OR13C4Q8NGS5 318 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 HCAR2Q8TDS4 363 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 ACMSDQ8TDX5 336 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 EID2BQ96D98 161 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 PPP1R16AQ96I34 528 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 MCCC1Q96RQ3 725 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-208ENST00000533123 MECRQ9BV79 373 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 GPR63Q9BZJ6 419 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 CD248Q9HCU0 757 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 PCDH12Q9NPG4 1184 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms