RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 H3BMM5 538 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 UBXN8O00124 270 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 TBC1D4O60343 1298 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 TLR5O60602 858 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 HSPA8P11142 646 aaKnown RBP16.81■□□□□ 0.28
VPS26B-206ENST00000531741 PRKAR2AP13861 404 aaKnown RBP16.81■□□□□ 0.28
VPS26B-206ENST00000531741 TM4SF4P48230 202 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 ACLYP53396 1101 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 ATXN3P54252 364 aaPredicted RBP16.81■□□□□ 0.28
VPS26B-206ENST00000531741 CDH13P55290 713 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 ATP6V0D1P61421 351 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 COQ5Q5HYK3 327 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 AFTPHQ6ULP2 937 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 OR9I1Q8NGQ6 314 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 TWIST2Q8WVJ9 160 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 ZNF597Q96LX8 424 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 PRICKLE1Q96MT3 831 aaPredicted RBP16.81■□□□□ 0.28
VPS26B-206ENST00000531741 EFHD1Q9BUP0 239 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 MRPS26Q9BYN8 205 aaKnown RBP16.81■□□□□ 0.28
VPS26B-206ENST00000531741 ELAC1Q9H777 363 aaKnown RBP16.81■□□□□ 0.28
VPS26B-206ENST00000531741 MID1IP1Q9NPA3 183 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 TAS2R13Q9NYV9 303 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 PADI4Q9UM07 663 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 GBF1Q92538 1859 aa16.81■□□□□ 0.28
VPS26B-206ENST00000531741 ATP6AP2A0A1C7CYW4 349 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 ATP6AP2O75787 350 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 SOAT2O75908 522 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 VNN2O95498 520 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 TSPAN8P19075 237 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 CD9P21926 228 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 GNA12Q03113 381 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 RALGDSQ12967 914 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 PTPRCAPQ14761 206 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 PFKFB4Q16877 469 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 RNF180Q86T96 592 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 LGI2Q8N0V4 545 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 TSPEARQ8WU66 669 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 NAT14Q8WUY8 206 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 ZUFSPQ96AP4 578 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 EME1Q96AY2 570 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 SLCO4A1Q96BD0 722 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 TTLL2Q9BWV7 592 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 C1QTNF3Q9BXJ4 246 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 GPR62Q9BZJ7 368 aa16.8■□□□□ 0.28
VPS26B-206ENST00000531741 FBRSL1Q9HCM7 1045 aaKnown RBP16.8■□□□□ 0.28
VPS26B-206ENST00000531741 A0A0J9YYE9 177 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 FAM58BPP0C7Q3 252 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 CES1P23141 567 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 CDH4P55283 916 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 CDKL1Q00532 357 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 LCP2Q13094 533 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 TAF1AQ15573 450 aaPredicted RBP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 OGFOD2Q6N063 350 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 MIER2Q8N344 545 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 MINDY1Q8N5J2 469 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 GOLM1Q8NBJ4 401 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 CEP295NLQ96MC4 621 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 CRISPLD1Q9H336 500 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 CCSER2Q9H7U1 834 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 VCX3AQ9NNX9 186 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 SDR39U1Q9NRG7 319 aaPredicted RBP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 ARMC1Q9NVT9 282 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 LZTS1Q9Y250 596 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 VPS9D1Q9Y2B5 631 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 SLC27A5Q9Y2P5 690 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 MED16Q9Y2X0 877 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 DNAH12Q6ZR08 3092 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 PIP5K1BO14986 540 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 ACSL4O60488 711 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 SIX3O95343 332 aaPredicted RBP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 STAMBPO95630 424 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 CLPTM1O96005 669 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 TFAP2AP05549 437 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 LBPP18428 481 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 SLC7A2P52569 658 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 MYBPC1Q00872 1141 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 GRIK2Q13002 908 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 SETMARQ53H47 684 aaPredicted RBP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 RETREG3Q86VR2 466 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 DHFR2Q86XF0 187 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 RYBPQ8N488 228 aaPredicted RBP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 EXT2Q93063 718 aa16.79■□□□□ 0.28
VPS26B-206ENST00000531741 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 DGCR14Q96DF8 476 aaKnown RBP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 SEPT5Q99719 369 aaPredicted RBP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 OAS3Q9Y6K5 1087 aaKnown RBP16.79■□□□□ 0.28
VPS26B-206ENST00000531741 A0A0D9SEW6 157 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 SYCE1LA8MT33 242 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 STX16O14662 325 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 KDELR3O43731 214 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 KLK8O60259 260 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 RHOBTB1O94844 696 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 RPS17P08708 135 aaKnown RBP16.78■□□□□ 0.28
VPS26B-206ENST00000531741 HSD17B1P14061 328 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 GFAPP14136 432 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 CR2P20023 1033 aa16.78■□□□□ 0.28
VPS26B-206ENST00000531741 TXNL4AP83876 142 aaKnown RBP16.78■□□□□ 0.28
VPS26B-206ENST00000531741 CLCQ05315 142 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms