RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TPM1P09493 284 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 TMEM253P0C7T8 217 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 LIPCP11150 499 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 NUDT1P36639 197 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 ARL4AP40617 200 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 ABL2P42684 1182 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 MLLT10P55197 1068 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 TAS2R40P59535 323 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 RHOAP61586 193 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 IL10RBQ08334 325 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 CCDC15Q0P6D6 951 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 ZNF211Q13398 564 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-212ENST00000528930 FGL2Q14314 439 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 ZNF284Q2VY69 593 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 TMEM259Q4ZIN3 620 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 ZNF805Q5CZA5 627 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 SEL1L3Q68CR1 1132 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 GDPD4Q6W3E5 623 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 HORMAD1Q86X24 394 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 CNGA4Q8IV77 575 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 RYBPQ8N488 228 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-212ENST00000528930 LZTR1Q8N653 840 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 MFSD2AQ8NA29 543 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 TMEM145Q8NBT3 493 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 C9orf43Q8TAL5 461 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-212ENST00000528930 SLC35G2Q8TBE7 412 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 CTNNBL1Q8WYA6 563 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-212ENST00000528930 KLK6Q92876 244 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 EXOC2Q96KP1 924 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 CCDC42Q96M95 316 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 NSMCE3Q96MG7 304 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 GDAP1L1Q96MZ0 367 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 KLHL32Q96NJ5 620 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 OSBPL1AQ9BXW6 950 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 CPEB1Q9BZB8 566 aaKnown RBP8.52□□□□□ -1.05
SSBP3-212ENST00000528930 DEF6Q9H4E7 631 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 SPTLC3Q9NUV7 552 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 UBA2Q9UBT2 640 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-212ENST00000528930 GDF2Q9UK05 429 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-212ENST00000528930 VPS4AQ9UN37 437 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 DMTF1Q9Y222 760 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 CA5BQ9Y2D0 317 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 TRPM6Q9BX84 2022 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 PRAMEF26H0Y7S4 382 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 TLR4O00206 839 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 DFFAO00273 331 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 AREL1O15033 823 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 MUSKO15146 869 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 SLC31A1O15431 190 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 BUB1BO60566 1050 aaPredicted RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 FAM155BO75949 473 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 MTA2O94776 668 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 PCDH8O95206 1070 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 IGSF6O95976 241 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 THEGLP0DJG4 465 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 CKMT1AP12532 417 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 BMP4P12644 408 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 PRLRP16471 622 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 ITIH2P19823 946 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 RGRP47804 291 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 CSNK1DP48730 415 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 ZNF75DP51815 510 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 CDH6P55285 790 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 NXPH1P58417 271 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 CTBSQ01459 385 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 RAD51Q06609 339 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 DPYSL3Q14195 570 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 STAT4Q14765 748 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 TCEAL1Q15170 157 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 HADHQ16836 314 aaKnown RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 ZXDCQ2QGD7 858 aaPredicted RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 SETMARQ53H47 684 aaPredicted RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 CD163Q86VB7 1156 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 IQCHQ86VS3 1027 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 SPATS2Q86XZ4 545 aaKnown RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 OXR1Q8N573 874 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 TSEN2Q8NCE0 465 aaKnown RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 MYRIPQ8NFW9 859 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 WDR36Q8NI36 951 aaKnown RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 RAB7BQ96AH8 199 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 MRFAP1L1Q96HT8 127 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 FEM1CQ96JP0 617 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 SLC12A9Q9BXP2 914 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 SLC17A9Q9BYT1 436 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 UNKQ9C0B0 810 aaKnown RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 ERVMER34-1Q9H9K5 563 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 GDF3Q9NR23 364 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 AASDHPPTQ9NRN7 309 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 RCOR3Q9P2K3 495 aaPredicted RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 IPO11Q9UI26 975 aaKnown RBP8.51□□□□□ -1.05
SSBP3-212ENST00000528930 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
SSBP3-212ENST00000528930 NBEAL1Q6ZS30 2694 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 TSPAN11A1L157 253 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 TSPAN6O43657 245 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 MAFKO60675 156 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 PALMO75781 387 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 PIGNO95427 931 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 LCA5LO95447 670 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms