RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 XKR4Q5GH76 650 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 JADE1Q6IE81 842 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 PSRC1Q6PGN9 363 aaPredicted RBP4.7□□□□□ -1.66
USP48-211ENST00000526044 DPY19L3Q6ZPD9 716 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 TRAPPC11Q7Z392 1133 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 WDR49Q8IV35 697 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 BRSK2Q8IWQ3 736 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 TTC30BQ8N4P2 665 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 TEX19Q8NA77 164 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 VPS37AQ8NEZ2 397 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 BEST2Q8NFU1 509 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 PHOSPHO2Q8TCD6 241 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 URGCPQ8TCY9 931 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 HERVK_113Q902F9 699 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 ANKRD36BP1Q96IX9 119 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 ZC3H10Q96K80 434 aaKnown RBP4.7□□□□□ -1.66
USP48-211ENST00000526044 ZMAT2Q96NC0 199 aaKnown RBP4.7□□□□□ -1.66
USP48-211ENST00000526044 HIST1H2AAQ96QV6 131 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 NAA15Q9BXJ9 866 aaKnown RBP4.7□□□□□ -1.66
USP48-211ENST00000526044 ZCWPW1Q9H0M4 648 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 CXCL16Q9H2A7 254 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 HSD3B7Q9H2F3 369 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 NDST4Q9H3R1 872 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 NXF3Q9H4D5 531 aaKnown RBP4.7□□□□□ -1.66
USP48-211ENST00000526044 GRPEL1Q9HAV7 217 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 TRIM36Q9NQ86 728 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 SLC38A7Q9NVC3 462 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 MIOSQ9NXC5 875 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 DPP3Q9NY33 737 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 TAB2Q9NYJ8 693 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 IFNKQ9P0W0 207 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 SERGEFQ9UGK8 458 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 UBQLN1Q9UMX0 589 aaKnown RBP4.7□□□□□ -1.66
USP48-211ENST00000526044 DERAQ9Y315 318 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 DNAH12Q6ZR08 3092 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 TTC3P53804 2025 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 MICAL3Q7RTP6 2002 aa4.7□□□□□ -1.66
USP48-211ENST00000526044 FSD2A1L4K1 749 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 H0YGN5 161 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 CES2O00748 559 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 P4HA2O15460 535 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 SNX2O60749 519 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 N4BP1O75113 896 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 RNASEH2AO75792 299 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 PRKCGP05129 697 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 TPM3P06753 285 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 KRT19P08727 400 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 TMEM191BP0C7N4 346 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 CD19P15391 556 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 ATF7P17544 494 aaPredicted RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 CYP3A5P20815 502 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 ATICP31939 592 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 RPL9P32969 192 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 MLH1P40692 756 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 HALP42357 657 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 STT3AP46977 705 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 PRIM2P49643 509 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 WDR5P61964 334 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 DEFB103AP81534 67 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 RBP5P82980 135 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 RNASELQ05823 741 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 GRIK3Q13003 919 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 BIRC3Q13489 604 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 TRPC3Q13507 836 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 KCNAB1Q14722 419 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 SHHQ15465 462 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 SGSM1Q2NKQ1 1148 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 CBWD6Q4V339 395 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 CBWD3Q5JTY5 395 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 CLLU1OSQ5K130 101 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 CBWD5Q5RIA9 395 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 C1orf220Q5T0J3 134 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 SPOUT1Q5T280 376 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 MANEALQ5VSG8 457 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 KRT39Q6A163 491 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 DCLRE1AQ6PJP8 1040 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 SARM1Q6SZW1 724 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 TRIM72Q6ZMU5 477 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 GBP6Q6ZN66 633 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 SFTPA1Q8IWL2 248 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 CCDC33Q8N5R6 958 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 ANKRD42Q8N9B4 389 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 CCDC150Q8NCX0 1101 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 FBXL13Q8NEE6 735 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 SEMA6DQ8NFY4 1073 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 OR5B17Q8NGF7 314 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 RSPH1Q8WYR4 309 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 ANP32BQ92688 251 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 SLC35C1Q96A29 364 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 DAZAP1Q96EP5 407 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 ZDHHC12Q96GR4 267 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 SNX27Q96L92 541 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 CASD1Q96PB1 797 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 PPP1R10Q96QC0 940 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 COLEC11Q9BWP8 271 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 XPO4Q9C0E2 1151 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 TMEM117Q9H0C3 514 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 TMEM8AQ9HCN3 771 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 RAB20Q9NX57 234 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 DNAJB11Q9UBS4 358 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms