RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CCDC157Q569K6 752 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNF542PQ5EBM4 170 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 PRRT3Q5FWE3 981 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 PRAMEF14Q5SWL7 426 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 ALS2CLQ60I27 953 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 PDPK2PQ6A1A2 396 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 DRICH1Q6PGQ1 229 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 DOK6Q6PKX4 331 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 TECPR1Q7Z6L1 1165 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 PIP4P1Q86T03 277 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 NLRP8Q86W28 1048 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 GKN2Q86XP6 184 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 GALNT13Q8IUC8 556 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 PHYKPLQ8IUZ5 450 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 SDR16C5Q8N3Y7 309 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 TAB3Q8N5C8 712 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 EID2Q8N6I1 236 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 PLA2G15Q8NCC3 412 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNF548Q8NEK5 533 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 GDAP1Q8TB36 358 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 SAP25Q8TEE9 199 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 SCAMP4Q969E2 229 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 MAGOHBQ96A72 148 aaKnown RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 FUBP1Q96AE4 644 aaKnown RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 RTP4Q96DX8 246 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 CNDP2Q96KP4 475 aaKnown RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 MRGPRX2Q96LB1 330 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 TTC25Q96NG3 672 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 RUNDC3BQ96NL0 473 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 PLEKHG4BQ96PX9 1271 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 APOL2Q9BQE5 337 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 RIOK2Q9BVS4 552 aaKnown RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 TEX101Q9BY14 249 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 ABCG8Q9H221 673 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 SUDS3Q9H7L9 328 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 CYP4F12Q9HCS2 524 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 RAB6BQ9NRW1 208 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPR27Q9NS67 375 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 NLGN3Q9NZ94 848 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 NFKBIL1Q9UBC1 381 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 PCOLCE2Q9UKZ9 415 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 TTC7AQ9ULT0 858 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 DRG1Q9Y295 367 aaKnown RBP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 CSNK1G3Q9Y6M4 447 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 ABCA7Q8IZY2 2146 aa5.38□□□□□ -1.55
HMGB1P40-201ENST00000525121 WDFY4Q6ZS81 3184 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 PCDH15Q96QU1 1955 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 GLYATL1P3A0A0U1RQE8 302 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 SPAARA0A1B0GVQ0 90 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 PRSS38A1L453 326 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 USP27XA6NNY8 438 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPR89AB7ZAQ6 455 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 LMO7DNF2Z398 122 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 K7ESM1 405 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 TPP1O14773 563 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 TM4SF5O14894 197 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 SCAMP1O15126 338 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 INPP4BO15327 924 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 PHF2O75151 1096 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 USP12O75317 370 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 SLC25A14O95258 325 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRIM16O95361 564 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 METTL18O95568 372 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 ECEL1O95672 775 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 APRTP07741 180 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPR89BP0CG08 455 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 RALBP11234 206 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 CDK4P11802 303 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 VCLP18206 1134 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 ITGALP20701 1170 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 CASQ1P31415 396 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 AKT1P31749 480 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 HMGCLP35914 325 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRIM23P36406 574 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 HADHAP40939 763 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 GNPDA1P46926 289 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 FNTAP49354 379 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 GDF10P55107 478 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 CDK16Q00536 496 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 FOXK2Q01167 660 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 CDH17Q12864 832 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 BNIP3Q12983 259 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 EIF2B5Q13144 721 aaKnown RBP5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 SEMA5AQ13591 1074 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 ITGA9Q13797 1035 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 IHHQ14623 411 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 PTPRRQ15256 657 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 PPP1R7Q15435 360 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 SHBQ15464 509 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 NR0B2Q15466 257 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 DEFB133Q30KQ1 61 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 HENMT1Q5T8I9 393 aaKnown RBP5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZCCHC8Q6NZY4 707 aaKnown RBP5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 LVRNQ6Q4G3 990 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 RANBP10Q6VN20 620 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 TMC3Q7Z5M5 1100 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 TAF8Q7Z7C8 310 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 GLRX5Q86SX6 157 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 RBFAQ8N0V3 343 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms