RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 GDF10P55107 478 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 CDK3Q00526 305 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 BNIP3Q12983 259 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 TRIP6Q15654 476 aaKnown RBP12.51□□□□□ -0.41
VEGFA-225ENST00000523950 FAM182AQ5T1J6 154 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 HENMT1Q5T8I9 393 aaKnown RBP12.51□□□□□ -0.41
VEGFA-225ENST00000523950 KCTD11Q693B1 232 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 ENPP7Q6UWV6 458 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 FSTL5Q8N475 847 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-225ENST00000523950 CCDC89Q8N998 374 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 ZNF548Q8NEK5 533 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-225ENST00000523950 DTX3LQ8TDB6 740 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 PLEKHG4BQ96PX9 1271 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 OSBPL9Q96SU4 736 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 ZSCAN5AQ9BUG6 496 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 FICDQ9BVA6 458 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 FAM83DQ9H4H8 585 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 LRRC40Q9H9A6 602 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 ARNT2Q9HBZ2 717 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 PAK5Q9P286 719 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 KLQ9UEF7 1012 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 FTSJ1Q9UET6 329 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 SNX12Q9UMY4 172 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 DGKBQ9Y6T7 804 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 PCNX2A6NKB5 2137 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 KNL1Q8NG31 2342 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 USP27XA6NNY8 438 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 F5H423 210 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-225ENST00000523950 K7ESM1 405 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 PGRMC1O00264 195 aaKnown RBP12.5□□□□□ -0.41
VEGFA-225ENST00000523950 SCAMP1O15126 338 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 AQP9O43315 295 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 TNFSF14O43557 240 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 SDC3O75056 442 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 METTL18O95568 372 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 AP2A1O95782 977 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 SOD1P00441 154 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 TNFP01375 233 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 IFNB1P01574 187 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 PIRTP0C851 137 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 CHRNA4P43681 627 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 SRP54P61011 504 aaKnown RBP12.5□□□□□ -0.41
VEGFA-225ENST00000523950 PDE1BQ01064 536 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 FOXK2Q01167 660 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 ALG11Q2TAA5 492 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 FAXCQ5TGI0 409 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 KDM7AQ6ZMT4 941 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 RFLNAQ6ZTI6 216 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 GLT6D1Q7Z4J2 308 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 LINC00523Q86TU6 105 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 SLC25A45Q8N413 288 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 SLC25A41Q8N5S1 370 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 TRAM1L1Q8N609 369 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 OR4C6Q8NH72 309 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 ACTRT1Q8TDG2 376 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 SCAMP4Q969E2 229 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 EID2BQ96D98 161 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 CAMK1GQ96NX5 476 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 TBL1YQ9BQ87 522 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 RIOK2Q9BVS4 552 aaKnown RBP12.5□□□□□ -0.41
VEGFA-225ENST00000523950 FRMD8Q9BZ67 464 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-225ENST00000523950 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 NLGN3Q9NZ94 848 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 NCKIPSDQ9NZQ3 722 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 CD84Q9UIB8 345 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 SHOC2Q9UQ13 582 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 BTBD3Q9Y2F9 522 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 SPO11Q9Y5K1 396 aa12.5□□□□□ -0.41
VEGFA-225ENST00000523950 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.5□□□□□ -0.412e-24■■■□□ 17.7
VEGFA-225ENST00000523950 ZNF106Q9H2Y7 1883 aaKnown RBP12.5□□□□□ -0.41
VEGFA-225ENST00000523950 GOLGA6L10A0A0M3HER8 536 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 A0A0U1RQS6 177 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 TMEM202A6NGA9 273 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 GOLGA8CPA6NN73 597 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 TRIM16O95361 564 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 CRTAMO95727 393 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 LDOC1O95751 146 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-225ENST00000523950 AGTP01019 485 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 IVLP07476 585 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 CDK4P11802 303 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 CTSEP14091 401 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 GNG11P61952 73 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 SEMA5AQ13591 1074 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 SNX1Q13596 522 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 ELOCQ15369 112 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 TAF1AQ15573 450 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-225ENST00000523950 CYP1B1Q16678 543 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 ZNF542PQ5EBM4 170 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 LVRNQ6Q4G3 990 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 HID1Q8IV36 788 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 PELI3Q8N2H9 469 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 TTC30BQ8N4P2 665 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 EID2Q8N6I1 236 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 PRELID2Q8N945 189 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 BRSK1Q8TDC3 778 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 BLOC1S5Q8TDH9 187 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 COX14Q96I36 57 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 HIC2Q96JB3 615 aa12.49□□□□□ -0.41
VEGFA-225ENST00000523950 CNDP2Q96KP4 475 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms