RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 AK4P27144 223 aaPredicted RBP18.62■□□□□ 0.57
SPIDR-220ENST00000522900 ACTN2P35609 894 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 CDKN2BP42772 138 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 ZNF75DP51815 510 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 HADHBP55084 474 aaKnown RBP18.62■□□□□ 0.57
SPIDR-220ENST00000522900 RPL26P61254 145 aaKnown RBP18.62■□□□□ 0.57
SPIDR-220ENST00000522900 ADCY2Q08462 1091 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 PDK1Q15118 436 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 TAZQ16635 292 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 ODF2Q5BJF6 829 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 C3orf38Q5JPI3 329 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 KDELC2Q7Z4H8 507 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 Q8N9G6 341 aaPredicted RBP18.62■□□□□ 0.57
SPIDR-220ENST00000522900 AGAP3Q96P47 875 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 RPL26L1Q9UNX3 145 aaKnown RBP18.62■□□□□ 0.57
SPIDR-220ENST00000522900 SLC17A4Q9Y2C5 497 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 RNF215Q9Y6U7 377 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 FGF1P05230 155 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 RPLP0P05388 317 aaKnown RBP18.61■□□□□ 0.57
SPIDR-220ENST00000522900 CA4P22748 312 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 CCDC173Q0VFZ6 552 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 SPIDRQ14159 915 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 HLTFQ14527 1009 aaKnown RBP eCLIP18.61■□□□□ 0.57
SPIDR-220ENST00000522900 CERCAMQ5T4B2 595 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 KAZNQ674X7 775 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 ADAMTSL4Q6UY14 1074 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 ZNF765Q7L2R6 523 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 B3GNT8Q7Z7M8 397 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 NLRP8Q86W28 1048 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 EID2BQ96D98 161 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 IMP4Q96G21 291 aaKnown RBP18.61■□□□□ 0.57
SPIDR-220ENST00000522900 PRR11Q96HE9 360 aaPredicted RBP18.61■□□□□ 0.57
SPIDR-220ENST00000522900 LYSMD1Q96S90 227 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 MLPHQ9BV36 600 aaPredicted RBP18.61■□□□□ 0.57
SPIDR-220ENST00000522900 BRD8Q9H0E9 1235 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 ASCL3Q9NQ33 180 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 LRIT1Q9P2V4 623 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 ACACAQ13085 2346 aa18.61■□□□□ 0.57
SPIDR-220ENST00000522900 C1orf232A0A0U1RR37 186 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 ANKRD66B4E2M5 251 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 INPP4BO15327 924 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 CST8O60676 142 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 DXOO77932 396 aaKnown RBP18.6■□□□□ 0.57
SPIDR-220ENST00000522900 IVLP07476 585 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 GLB1P16278 677 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 PECAM1P16284 738 aaPredicted RBP18.6■□□□□ 0.57
SPIDR-220ENST00000522900 ADCY8P40145 1251 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 ABCG1P45844 678 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 MARCKSL1P49006 195 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 MAZP56270 477 aaKnown RBP18.6■□□□□ 0.57
SPIDR-220ENST00000522900 CTBSQ01459 385 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 GALNT3Q14435 633 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 C14orf28Q4W4Y0 310 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 SPOCD1Q6ZMY3 1216 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 GAS2L3Q86XJ1 694 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 CCDC170Q8IYT3 715 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 NRSN1Q8IZ57 195 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 OR6C4Q8NGE1 309 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 SPATA22Q8NHS9 363 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 WDR48Q8TAF3 677 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 SCARF2Q96GP6 870 aaPredicted RBP18.6■□□□□ 0.57
SPIDR-220ENST00000522900 NAF1Q96HR8 494 aaKnown RBP18.6■□□□□ 0.57
SPIDR-220ENST00000522900 HIC2Q96JB3 615 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 GFM1Q96RP9 751 aaKnown RBP18.6■□□□□ 0.57
SPIDR-220ENST00000522900 TRIB3Q96RU7 358 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 LRRN3Q9H3W5 708 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 TRNAU1APQ9NX07 287 aaKnown RBP18.6■□□□□ 0.57
SPIDR-220ENST00000522900 TAAR2Q9P1P5 351 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 APPL1Q9UKG1 709 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 CNOT6Q9ULM6 557 aaKnown RBP18.6■□□□□ 0.57
SPIDR-220ENST00000522900 ZFYVE26Q68DK2 2539 aa18.6■□□□□ 0.57
SPIDR-220ENST00000522900 RCCD1A6NED2 376 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 SOWAHDA6NJG2 315 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 PPP1R12AO14974 1030 aaPredicted RBP18.59■□□□□ 0.57
SPIDR-220ENST00000522900 RRP8O43159 456 aaKnown RBP18.59■□□□□ 0.57
SPIDR-220ENST00000522900 PSTPIP1O43586 416 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 PIRTP0C851 137 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 SPINT3P49223 89 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 ILF3Q12906 894 aaKnown RBP eCLIP18.59■□□□□ 0.57
SPIDR-220ENST00000522900 PCSK7Q16549 785 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 FOXR1Q6PIV2 292 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 SLC30A9Q6PML9 568 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 LRRC69Q6ZNQ3 347 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 MARK2Q7KZI7 788 aaKnown RBP18.59■□□□□ 0.57
SPIDR-220ENST00000522900 LYSMD3Q7Z3D4 306 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 NT5DC3Q86UY8 548 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 CCNJLQ8IV13 435 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 LSMEM2Q8N112 164 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 EXD1Q8NHP7 514 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 ZDHHC1Q8WTX9 485 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 PATE1Q8WXA2 126 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 TADA1Q96BN2 335 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 GRAMD1AQ96CP6 724 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 COX14Q96I36 57 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 ZNF578Q96N58 590 aaPredicted RBP18.59■□□□□ 0.57
SPIDR-220ENST00000522900 SLC46A1Q96NT5 459 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 GSDMCQ9BYG8 508 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 FOXP3Q9BZS1 431 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 SLC25A51Q9H1U9 297 aa18.59■□□□□ 0.57
SPIDR-220ENST00000522900 GLOD4Q9HC38 313 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms