RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	CSNK2A1	P68400	391 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	REL	Q04864	619 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	SLC20A2	Q08357	652 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	TBX2	Q13207	712 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	DECR1	Q16698	335 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	DPCR1	Q3MIW9	517 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	ACCSL	Q4AC99	568 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	RGMB	Q6NW40	437 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	DPPA4	Q7L190	304 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	HAPLN4	Q86UW8	402 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	TMEM219	Q86XT9	240 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	RNF113B	Q8IZP6	322 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	CSNK2A3	Q8NEV1	391 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	TAAR8	Q969N4	342 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	TTC14	Q96N46	770 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	ACOX2	Q99424	681 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	KIF9	Q9HAQ2	790 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	SCPEP1	Q9HB40	452 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	LOXL2	Q9Y4K0	774 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	SCN5A	Q14524	2016 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115		A0A087WYN8	130 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115		A0A1W2PQF6	199 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	CCDC189	A1A4V9	331 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	CAMTA2	O94983	1202 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	IGKV3-20	P01619	116 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	IGLV2-11	P01706	119 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	CLEC3B	P05452	202 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	UMOD	P07911	640 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	ANOS1	P23352	680 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	TMPO	P42166	694 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	CCR9	P51686	369 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	FUT6	P51993	359 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	ZNF132	P52740	706 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	RARS	P54136	660 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	ARL16	Q0P5N6	197 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	CSTF3	Q12996	717 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	GRIK2	Q13002	908 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	ATF7IP	Q6VMQ6	1270 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	DSTYK	Q6XUX3	929 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	DIS3L2	Q8IYB7	885 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	PCDH20	Q8N6Y1	951 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	THAP6	Q8TBB0	222 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	ETNPPL	Q8TBG4	499 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	INTS12	Q96CB8	462 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	CDCA5	Q96FF9	252 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	HARBI1	Q96MB7	349 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	C7orf26	Q96N11	449 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	INPP4A	Q96PE3	977 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	PCDHB16	Q9NRJ7	776 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	TXLNG	Q9NUQ3	528 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	DLGAP2	Q9P1A6	1054 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	UBA2	Q9UBT2	640 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	MKLN1	Q9UL63	735 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	PCDHAC2	Q9Y5I4	1007 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	PSAT1	Q9Y617	370 aa		4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115	PDS5A	Q29RF7	1337 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-215	ENST00000522115		A0A0B4J293	547 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	EIF3CL	B5ME19	914 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	VCY	O14598	125 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	SPINT2	O43291	252 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	ATP1A3	P13637	1013 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	UBA1	P22314	1058 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	PITX1	P78337	314 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZBED6	P86452	979 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	FOXM1	Q08050	763 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	TMEM115	Q12893	351 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	KRTAP24-1	Q3LI83	254 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	JAKMIP3	Q5VZ66	844 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	DUS1L	Q6P1R4	473 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	TSSK4	Q6SA08	328 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	KMT5C	Q86Y97	462 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	NRROS	Q86YC3	692 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	ODF3L1	Q8IXM7	274 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZNF34	Q8IZ26	560 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	BEST3	Q8N1M1	668 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	LMNTD1	Q8N9Z9	388 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	TMEM116	Q8NCL8	245 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	SLC20A1	Q8WUM9	679 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	SGCD	Q92629	289 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	CD101	Q93033	1021 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	IGSF8	Q969P0	613 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	MMAB	Q96EY8	250 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	RRNAD1	Q96FB5	475 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	GRAMD2B	Q96HH9	432 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	PDCL3	Q9H2J4	239 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	FKRP	Q9H9S5	495 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	PADI1	Q9ULC6	663 aa		4.15	□□□□□ -1.75
PTPN12-215	ENST00000522115	FAM172BP	A6NC97	362 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	ASPDH	A6ND91	283 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115		B4E171	279 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	DAB1	O75553	588 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	CCNDBP1	O95273	360 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	IPO7	O95373	1038 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	CDH1	P12830	882 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	CD53	P19397	219 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	CORO1A	P31146	461 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	UBA7	P41226	1012 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms