RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 NDUFS3O75489 264 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 LCATP04180 440 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 HSPA5P11021 654 aaKnown RBP6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 CD58P19256 250 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 GPTP24298 496 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 STIP1P31948 543 aaKnown RBP6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 NR4A2P43354 598 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 RFX5P48382 616 aaPredicted RBP6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 PMS2P54278 862 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 NLRP5P59047 1200 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 NAE1Q13564 534 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 NEDD9Q14511 834 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 WTAPQ15007 396 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 C2orf68Q2NKX9 166 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 DUSP28Q4G0W2 176 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 HIST2H2BCQ6DN03 193 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 HIST2H2BDQ6DRA6 164 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 PLEKHA7Q6IQ23 1121 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 KRTAP5-3Q6L8H2 238 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 GLDNQ6ZMI3 551 aaPredicted RBP6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 ADGRF2Q8IZF7 708 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 ARRDC2Q8TBH0 407 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 TRIB2Q92519 343 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 ERGIC1Q969X5 290 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF778Q96MU6 729 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 TMEM47Q9BQJ4 181 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 NUDT16L1Q9BRJ7 211 aaKnown RBP6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 SMARCAD1Q9H4L7 1026 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 PDZD7Q9H5P4 517 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 RANGRFQ9HD47 186 aaPredicted RBP6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 ERVK-11Q9UQG0 969 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 RAD50Q92878 1312 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 TMEM202A6NGA9 273 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 FAM90A8PA6NJQ4 464 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 VWA5AO00534 786 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 TSPAN9O75954 239 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 SOX30O94993 753 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 FAM90A13PP0C7W8 464 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 FAM90A24PP0C7X0 464 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 HOXB2P14652 356 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 NAGAP17050 411 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 RRM1P23921 792 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 GARSP41250 739 aaKnown RBP6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 PIK3CAP42336 1068 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF81P51508 661 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 CDH8P55286 799 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 AIMP2Q13155 320 aaKnown RBP6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 ACVR2BQ13705 512 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF425Q6IV72 752 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 CHST9Q7L1S5 443 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 SZRD1Q7Z422 152 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 TICAM1Q8IUC6 712 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 CCDC13Q8IYE1 715 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 CCDC191Q8NCU4 936 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 AGBL3Q8NEM8 1001 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 HMCESQ96FZ2 354 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 VMP1Q96GC9 406 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 C1QTNF7Q9BXJ2 289 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 TRIM6Q9C030 488 aaPredicted RBP6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 MKKSQ9NPJ1 570 aaPredicted RBP6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 OR6C3Q9NZP0 311 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 RABGAP1Q9Y3P9 1069 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 SESN1Q9Y6P5 492 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 STON1Q9Y6Q2 735 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 LRRC9Q6ZRR7 1453 aa6.72□□□□□ -1.33
NUDCD1-204ENST00000521439 KTN1Q86UP2 1357 aaKnown RBP6.71□□□□□ -1.33
NUDCD1-204ENST00000521439 hCG_1807616A0A1W2PRN6 198 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 BTBD18B2RXH4 712 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 HCRTR2O43614 444 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 PORP16435 677 aaPredicted RBP6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 MCM3P25205 808 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 RFX2P48378 723 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 CHAF1BQ13112 559 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 CTTNQ14247 550 aaKnown RBP6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 HNF4GQ14541 408 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 TOMM20Q15388 145 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 FSCBQ5H9T9 825 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 C16orf54Q6UWD8 224 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 MTSS1LQ765P7 747 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 C1QL2Q7Z5L3 287 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 IRF2BP2Q7Z5L9 587 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 CCDC91Q7Z6B0 441 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 SRBD1Q8N5C6 995 aaKnown RBP6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 SMG7Q92540 1137 aaKnown RBP6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 TAF4BQ92750 862 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 FRAT1Q92837 279 aaPredicted RBP6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 ZKSCAN4Q969J2 545 aaPredicted RBP6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 CENPTQ96BT3 561 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 PGAM5Q96HS1 289 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 MMTAG2Q9BU76 263 aaKnown RBP6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 IFIH1Q9BYX4 1025 aaKnown RBP6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 COMMD8Q9NX08 183 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 HOXC10Q9NYD6 342 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 MAU2Q9Y6X3 613 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 ZNF521Q96K83 1311 aa6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 VIRMAQ69YN4 1812 aaKnown RBP6.71□□□□□ -1.34
NUDCD1-204ENST00000521439 HFM1A2PYH4 1435 aa6.7□□□□□ -1.34
NUDCD1-204ENST00000521439 A0A1B0GVM2 712 aa6.7□□□□□ -1.34
NUDCD1-204ENST00000521439 TMEM110-MUSTN1A8MSY1 372 aa6.7□□□□□ -1.34
NUDCD1-204ENST00000521439 B4DGG1 531 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms