RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RARGP13631 454 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 TKTP29401 623 aaKnown RBP6.09□□□□□ -1.43
PTPN12-213ENST00000519553 HYIQ5T013 277 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 PRSS57Q6UWY2 283 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 GLDNQ6ZMI3 551 aaPredicted RBP6.09□□□□□ -1.43
PTPN12-213ENST00000519553 ADHFE1Q8IWW8 467 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 WDTC1Q8N5D0 677 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 SMRP1Q8NCR6 262 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 MTBPQ96DY7 904 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 GRAMD2BQ96HH9 432 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 ADGRG7Q96K78 797 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 C3orf30Q96M34 536 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 OR1F2PQ96R84 312 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 RRP7BPQ9NSQ0 103 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 ACSS1Q9NUB1 689 aaPredicted RBP6.09□□□□□ -1.43
PTPN12-213ENST00000519553 ZNF224Q9NZL3 707 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 MID1O15344 667 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 OR2C1O95371 312 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 PMS2P2O95744 297 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 BDKRB2P30411 391 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 HOXC9P31274 260 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 UBA7P41226 1012 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 ZNF155Q12901 538 aaPredicted RBP6.08□□□□□ -1.44
PTPN12-213ENST00000519553 GKAP1Q5VSY0 366 aaPredicted RBP6.08□□□□□ -1.44
PTPN12-213ENST00000519553 FRG2Q64ET8 278 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 SIGIRRQ6IA17 410 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 KIAA1161Q6NSJ0 714 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 CACNA2D4Q7Z3S7 1137 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 BEST3Q8N1M1 668 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 PCDH20Q8N6Y1 951 aaKnown RBP6.08□□□□□ -1.44
PTPN12-213ENST00000519553 SGCDQ92629 289 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 TANKQ92844 425 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 RHBDF1Q96CC6 855 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 C6orf106Q9H6K1 298 aaPredicted RBP6.08□□□□□ -1.44
PTPN12-213ENST00000519553 PCDH9Q9HC56 1237 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 SEPT11Q9NVA2 429 aaKnown RBP6.08□□□□□ -1.44
PTPN12-213ENST00000519553 SMARCAL1Q9NZC9 954 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 SIX4Q9UIU6 781 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 CLIC4Q9Y696 253 aa6.08□□□□□ -1.44
PTPN12-213ENST00000519553 FRMD3A2A2Y4 597 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 NDUFS3O75489 264 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 EGFP01133 1207 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 FGF3P11487 239 aaPredicted RBP6.07□□□□□ -1.44
PTPN12-213ENST00000519553 PEX5P50542 639 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 CLCNKAP51800 687 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 EIF5P55010 431 aaKnown RBP6.07□□□□□ -1.44
PTPN12-213ENST00000519553 CSNK2A1P68400 391 aaPredicted RBP6.07□□□□□ -1.44
PTPN12-213ENST00000519553 SNTA1Q13424 505 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 SF3B4Q15427 424 aaKnown RBP eCLIP6.07□□□□□ -1.443e-7■■■□□ 15.6
PTPN12-213ENST00000519553 ADIPOQQ15848 244 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 ASIC2Q16515 512 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 LRIF1Q5T3J3 769 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 DUS1LQ6P1R4 473 aaKnown RBP6.07□□□□□ -1.44
PTPN12-213ENST00000519553 SARM1Q6SZW1 724 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 C4orf50Q6ZRC1 276 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 NRROSQ86YC3 692 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 SRBD1Q8N5C6 995 aaKnown RBP6.07□□□□□ -1.44
PTPN12-213ENST00000519553 CSNK2A3Q8NEV1 391 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 LMO3Q8TAP4 145 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 HARBI1Q96MB7 349 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 SEPT5Q99719 369 aaPredicted RBP6.07□□□□□ -1.44
PTPN12-213ENST00000519553 MCM9Q9NXL9 1143 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 ACSL5Q9ULC5 683 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 PADI3Q9ULW8 664 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 LYVE1Q9Y5Y7 322 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 RUSC2Q8N2Y8 1516 aa6.07□□□□□ -1.44
PTPN12-213ENST00000519553 GOLGA6L9A6NEM1 432 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 ATP2A1O14983 1001 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 SCAMP1O15126 338 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 DOK2O60496 412 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 HNRNPCL1O60812 293 aaKnown RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 ZBED4O75132 1171 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 JRKO75564 520 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 DAOP14920 347 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 UBA1P22314 1058 aaKnown RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 RRM1P23921 792 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 PPARGP37231 505 aaPredicted RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 ARF3P61204 181 aaPredicted RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 ARF1P84077 181 aaKnown RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 TNFAIP1Q13829 316 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 ASTE1Q2TB18 679 aaPredicted RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 JADE1Q6IE81 842 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 KLHL35Q6PF15 583 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 CCNI2Q6ZMN8 369 aaPredicted RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 RNF168Q8IYW5 571 aaPredicted RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 RBMXL3Q8N7X1 1067 aaKnown RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 SCFD2Q8WU76 684 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 ZKSCAN4Q969J2 545 aaPredicted RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 ORAI1Q96D31 301 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 CMTM3Q96MX0 182 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 TREX2Q9BQ50 279 aaPredicted RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 DDX31Q9H8H2 851 aaKnown RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 TBC1D22BQ9NU19 505 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 CWC15Q9P013 229 aaKnown RBP6.06□□□□□ -1.44
PTPN12-213ENST00000519553 ZNF580Q9UK33 172 aa6.06□□□□□ -1.44
PTPN12-213ENST00000519553 BTBD18B2RXH4 712 aa6.05□□□□□ -1.44
PTPN12-213ENST00000519553 ZNF587BE7ETH6 402 aa6.05□□□□□ -1.44
PTPN12-213ENST00000519553 ITGB6P18564 788 aa6.05□□□□□ -1.44
PTPN12-213ENST00000519553 HADHAP40939 763 aa6.05□□□□□ -1.44
PTPN12-213ENST00000519553 GARSP41250 739 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms