RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 PHACTR4Q8IZ21 702 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 GUF1Q8N442 669 aaKnown RBP6.08□□□□□ -1.44
PABPC1-207ENST00000518716 ARL10Q8N8L6 244 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 KYQ8NBH2 561 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 DENND6BQ8NEG7 585 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 VPS37AQ8NEZ2 397 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 GPR156Q8NFN8 814 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 LMO3Q8TAP4 145 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 USP7Q93009 1102 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 INTS4Q96HW7 963 aaKnown RBP6.08□□□□□ -1.44
PABPC1-207ENST00000518716 FEM1CQ96JP0 617 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 PPP1R13BQ96KQ4 1090 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 TMEM74Q96NL1 305 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 GFM1Q96RP9 751 aaKnown RBP6.08□□□□□ -1.44
PABPC1-207ENST00000518716 STRADBQ9C0K7 418 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 MIS12Q9H081 205 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 LRRN3Q9H3W5 708 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 MMRN2Q9H8L6 949 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 EPB41L5Q9HCM4 733 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 EXOC1Q9NV70 894 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.08□□□□□ -1.44
PABPC1-207ENST00000518716 SEPT10Q9P0V9 454 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 PISDQ9UG56 409 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 VPS51Q9UID3 782 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 SLC25A13Q9UJS0 675 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 CNTN6Q9UQ52 1028 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 LOXL2Q9Y4K0 774 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 PCDHGB7Q9Y5F8 929 aa6.08□□□□□ -1.44
PABPC1-207ENST00000518716 CHD5Q8TDI0 1954 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 SHANK1Q9Y566 2161 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 FBN2P35556 2912 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 A0A0D9SEW6 157 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 DRGXA6NNA5 263 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 ENO4A6NNW6 628 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 TOR1BO14657 336 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 FPGTO14772 594 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 TSPAN6O43657 245 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 PAGE1O75459 146 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 CNTN5O94779 1100 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 RPLP0P05388 317 aaKnown RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 ANXA6P08133 673 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 RPL13P26373 211 aaKnown RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 ERCC5P28715 1186 aaPredicted RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 IGFALSP35858 605 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 ST13P50502 369 aaKnown RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 CDH4P55283 916 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 YWHAZP63104 245 aaKnown RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 C16orf72Q14CZ0 275 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 NCAPHQ15003 741 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 MEA1Q16626 185 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 ALFQ53S48 1182 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 RABGAP1LQ5R372 815 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 CERCAMQ5T4B2 595 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 OTUD1Q5VV17 481 aaPredicted RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 KCTD16Q68DU8 428 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 ESRP1Q6NXG1 681 aaKnown RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 C22orf39Q6P5X5 142 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 TMEM270Q6UE05 265 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 MACC1Q6ZN28 852 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 PARS2Q7L3T8 475 aaKnown RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 C17orf82Q86X59 251 aaPredicted RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 JAMLQ86YT9 394 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 FSTL5Q8N475 847 aaPredicted RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 ATP6V0D2Q8N8Y2 350 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 OR6C4Q8NGE1 309 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 NKD1Q969G9 470 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 SLC35C1Q96A29 364 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 SLC2A13Q96QE2 648 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 SPRY4Q9C004 299 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 CDH19Q9H159 772 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 THAP9Q9H5L6 903 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 RETREG1Q9H6L5 497 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 ZNF552Q9H707 407 aaPredicted RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 POPDC2Q9HBU9 364 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 ANLNQ9NQW6 1124 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 MBNL1Q9NR56 388 aaKnown RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 PLEKHB1Q9UF11 243 aaPredicted RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 APOBEC3BQ9UH17 382 aaKnown RBP6.07□□□□□ -1.44
PABPC1-207ENST00000518716 IL36AQ9UHA7 158 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 VPS28Q9UK41 221 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 HPSEQ9Y251 543 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 PCDHGA3Q9Y5H0 932 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 HS3ST4Q9Y661 456 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 DOCK4Q8N1I0 1966 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 CELSR2Q9HCU4 2923 aa6.07□□□□□ -1.44
PABPC1-207ENST00000518716 LRP4O75096 1905 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 IGLV3-10A0A075B6K4 115 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 FAM237AA0A1B0GTK4 181 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 CXorf51AA0A1B0GTR3 108 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 C16orf96A6NNT2 1141 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 WASH4PA8MWX3 477 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 GOLGA6L22H0YM25 854 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 M0QYV0 167 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 STX10O60499 249 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 S100BP04271 92 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 JMJD7P0C870 316 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 RNF224P0DH78 156 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 SLC2A3P11169 496 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 CCL4P13236 92 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms