RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 METTL25Q8N6Q8 603 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 OR2T34Q8NGX1 318 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 OR2T3Q8NH03 318 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 BLOC1S5Q8TDH9 187 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 TWIST2Q8WVJ9 160 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 CDKN2AIPNLQ96HQ2 116 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 SPATA17Q96L03 361 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 MGME1Q9BQP7 344 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 C1QTNF3Q9BXJ4 246 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 VWA8A3KMH1 1905 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 LCHNA4D1U4 455 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 AQP12BA6NM10 295 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 H3BMM5 538 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 OR6B1O95007 311 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 SERPINF2P08697 491 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 PSMC3P17980 439 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 TSPAN8P19075 237 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 ZNF235Q14590 738 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 AP1ARQ63HQ0 302 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 NADSYN1Q6IA69 706 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 OGFOD2Q6N063 350 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 AQP12AQ8IXF9 295 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 MIER2Q8N344 545 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 ATAD1Q8NBU5 361 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 STAG3L4Q8TBR4 150 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 TCF12Q99081 682 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 MID1IP1Q9NPA3 183 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 SLC52A3Q9NQ40 469 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 NLE1Q9NVX2 485 aaPredicted RBP17.47■□□□□ 0.39
SNX2-213ENST00000514949 MED16Q9Y2X0 877 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 GREB1Q4ZG55 1949 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 SLC12A8A0AV02 714 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 UBXN8O00124 270 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 ZNF140P52738 457 aaPredicted RBP17.46■□□□□ 0.39
SNX2-213ENST00000514949 NR1H2P55055 460 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 ATP6V0D1P61421 351 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 FOXM1Q08050 763 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 TAF10Q12962 218 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 LCP2Q13094 533 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 NADK2Q4G0N4 442 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 SETMARQ53H47 684 aaPredicted RBP17.46■□□□□ 0.39
SNX2-213ENST00000514949 C10orf120Q5SQS8 335 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 HMBOX1Q6NT76 420 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 PPP4R4Q6NUP7 873 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 MIB1Q86YT6 1006 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 OR13C4Q8NGS5 318 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNX2-213ENST00000514949 TUBB1Q9H4B7 451 aa17.46■□□□□ 0.39
SNX2-213ENST00000514949 CCM2LQ9NUG4 571 aaPredicted RBP17.46■□□□□ 0.39
SNX2-213ENST00000514949 TRMT13Q9NUP7 481 aaKnown RBP17.46■□□□□ 0.39
SNX2-213ENST00000514949 PPP6CO00743 305 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 PIP5K1BO14986 540 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 KLK8O60259 260 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 GJB3O75712 270 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 SIX3O95343 332 aaPredicted RBP17.45■□□□□ 0.38
SNX2-213ENST00000514949 SLC4A1P02730 911 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 PRR35P0CG20 571 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 CD9P21926 228 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 OR1G1P47890 313 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 CRHR2Q13324 411 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 PFKFB4Q16877 469 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 CTXN3Q4LDR2 81 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 TRAF7Q6Q0C0 670 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 TTC9BQ8N6N2 239 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 MYEOVQ96EZ4 313 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 PSKH2Q96QS6 385 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 PRPF18Q99633 342 aaKnown RBP17.45■□□□□ 0.38
SNX2-213ENST00000514949 MAGEH1Q9H213 219 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 APPL1Q9UKG1 709 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 CNOT6Q9ULM6 557 aaKnown RBP17.45■□□□□ 0.38
SNX2-213ENST00000514949 RNF11Q9Y3C5 154 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 FXYD1O00168 92 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 NME4O00746 187 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 CLASP2O75122 1294 aaKnown RBP17.45■□□□□ 0.38
SNX2-213ENST00000514949 STAMBPO95630 424 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 LBPP18428 481 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 TACR2P21452 398 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 HOXD9P28356 352 aaPredicted RBP17.45■□□□□ 0.38
SNX2-213ENST00000514949 FOXA1P55317 472 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 BNIP2Q12982 314 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 PTPRCAPQ14761 206 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 ERMP1Q7Z2K6 904 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 CIR1Q86X95 450 aaPredicted RBP17.45■□□□□ 0.38
SNX2-213ENST00000514949 PACRGLQ8N7B6 248 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 LINC01599Q8WXQ3 324 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 DMTF1Q9Y222 760 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 ARIH1Q9Y4X5 557 aaPredicted RBP17.45■□□□□ 0.38
SNX2-213ENST00000514949 GBF1Q92538 1859 aa17.45■□□□□ 0.38
SNX2-213ENST00000514949 STX16O14662 325 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 RPS17P08708 135 aaKnown RBP17.44■□□□□ 0.38
SNX2-213ENST00000514949 IDO1P14902 403 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 CAPN3P20807 821 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 CLCQ05315 142 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 GALNT3Q14435 633 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 GRB7Q14451 532 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 KIF19Q2TAC6 998 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 MTX3Q5HYI7 312 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 LCN8Q6JVE9 175 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 IYDQ6PHW0 289 aa17.44■□□□□ 0.38
SNX2-213ENST00000514949 LAYNQ6UX15 382 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms