RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 GLTPD2A6NH11 291 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 FAM72CH0Y354 149 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 PTGESO14684 152 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 DCLK1O15075 740 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 SNAP91O60641 907 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 THP07101 528 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 YBX3P16989 372 aaKnown RBP eCLIP9.64□□□□□ -0.87
VCAN-210ENST00000513960 TAS2R39P59534 338 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 C1QTNF8P60827 252 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 RAB10P61026 200 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 ZNF846Q147U1 533 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 INAQ16352 499 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 TMTC4Q5T4D3 741 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 FAM72AQ5TYM5 149 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 FAM72DQ6L9T8 149 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 OTOP3Q7RTS5 596 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 LIMS2Q7Z4I7 341 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 FAM72BQ86X60 149 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 CLIP4Q8N3C7 705 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 C2orf69Q8N8R5 385 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 NCLNQ969V3 563 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 NTAN1Q96AB6 310 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 GAD1Q99259 594 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 CACNG4Q9UBN1 327 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 ITGB1BP2Q9UKP3 347 aa9.64□□□□□ -0.87
VCAN-210ENST00000513960 CNOT11Q9UKZ1 510 aaKnown RBP9.64□□□□□ -0.87
VCAN-210ENST00000513960 C16orf96A6NNT2 1141 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 H3BMM5 538 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 PFDN6O15212 129 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 TBC1D4O60343 1298 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 SNX2O60749 519 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 MFN2O95140 757 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 AP2A1O95782 977 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 GFAPP14136 432 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 RABL3Q5HYI8 236 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 LDB1Q86U70 411 aaPredicted RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 RALGPS2Q86X27 583 aaPredicted RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 ALDH16A1Q8IZ83 802 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 SIX5Q8N196 739 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 TMEM86AQ8N2M4 240 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 OR7A2PQ8NGA2 310 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 SPATA22Q8NHS9 363 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 EDEM1Q92611 657 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 VPS33AQ96AX1 596 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 FICDQ9BVA6 458 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 ITM2CQ9NQX7 267 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 FBXW11Q9UKB1 542 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 SNX10Q9Y5X0 201 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 MYBPHLA2RUH7 354 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 ERI2A8K979 691 aaKnown RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 CCL22O00626 93 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 AURKAO14965 403 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 C8BP07358 591 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 CYP2B6P20813 491 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 KCNJ8Q15842 424 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 UGP2Q16851 508 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 RSBN1Q5VWQ0 802 aaPredicted RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 TAS2R42Q7RTR8 314 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 PIWIL4Q7Z3Z4 852 aaKnown RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 DSG4Q86SJ6 1040 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 PLD3Q8IV08 490 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 KDM1BQ8NB78 822 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 ZNF555Q8NEP9 628 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 SPPL2BQ8TCT7 592 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 PCED1BQ96HM7 432 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 COLEC11Q9BWP8 271 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 RHOJQ9H4E5 214 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 MID1IP1Q9NPA3 183 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 CRTAC1Q9NQ79 661 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 SUN2Q9UH99 717 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 TRHDEQ9UKU6 1024 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 TRAF6Q9Y4K3 522 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 NCF1BA6NI72 391 aaPredicted RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 NCF1CA8MVU1 366 aaPredicted RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 GABRDO14764 452 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 NOBOXO60393 691 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 AHSGP02765 367 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 NCF1P14598 390 aaPredicted RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 S100A1P23297 94 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 ATP5F1P24539 256 aaPredicted RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 PCSK1P29120 753 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 FPGSQ05932 587 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 NSUN2Q08J23 767 aaKnown RBP eCLIP9.63□□□□□ -0.87
VCAN-210ENST00000513960 MAPRE1Q15691 268 aaKnown RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 CCNYL2Q5T2Q4 361 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 BNIPLQ7Z465 357 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 SGCDQ92629 289 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 SYT17Q9BSW7 474 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 TKTL2Q9H0I9 626 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 UTP6Q9NYH9 597 aaKnown RBP9.63□□□□□ -0.87
VCAN-210ENST00000513960 OR12D3Q9UGF7 316 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 PSME2Q9UL46 239 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 ANKRD6Q9Y2G4 727 aa9.63□□□□□ -0.87
VCAN-210ENST00000513960 MAGEB16A2A368 324 aa9.62□□□□□ -0.87
VCAN-210ENST00000513960 H0Y858 1186 aa9.62□□□□□ -0.87
VCAN-210ENST00000513960 ARPC2O15144 300 aa9.62□□□□□ -0.87
VCAN-210ENST00000513960 AQP9O43315 295 aa9.62□□□□□ -0.87
VCAN-210ENST00000513960 LINC00032P0C843 101 aa9.62□□□□□ -0.87
VCAN-210ENST00000513960 IDO1P14902 403 aa9.62□□□□□ -0.87
VCAN-210ENST00000513960 MYF6P23409 242 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms