RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 DNPEPQ9ULA0 475 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 CNOT6Q9ULM6 557 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 PACSIN2Q9UNF0 486 aaPredicted RBP16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 EME2A4GXA9 379 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 MIF4GDA9UHW6 222 aaKnown RBP16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 H7C0C1 242 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 ARHGAP6O43182 974 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 PMPCBO75439 489 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 TJP3O95049 919 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 NDST3O95803 873 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 FTCDO95954 541 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 MYCLP1P12525 358 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 JUPP14923 745 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 NFKB1P19838 968 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 GPR1P46091 355 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 ATP5OP48047 213 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 POLD2P49005 469 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 CLDN6P56747 220 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 GALNT3Q14435 633 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 C6orf132Q5T0Z8 1188 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 UBL4BQ8N7F7 174 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 UBE2Q2Q8WVN8 375 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 PDXPQ96GD0 296 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 SCARF2Q96GP6 870 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 OXNAD1Q96HP4 312 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 TMEM168Q9H0V1 697 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 FAM83DQ9H4H8 585 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 CYP4F12Q9HCS2 524 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 FAM153AQ9UHL3 310 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 SLC17A4Q9Y2C5 497 aa16.08■□□□□ 0.16
PDLIM5-216ENST00000511767 IGF2RP11717 2491 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 C1orf232A0A0U1RR37 186 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 TRABD2BA6NFA1 517 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 OPA1O60313 960 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 GP1BAP07359 652 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 RBP3P10745 1247 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 WNT3AP56704 352 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 EIF3EP60228 445 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 INSM1Q01101 510 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 PCSK7Q16549 785 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 CCDC181Q5TID7 509 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 RAET1GQ6H3X3 334 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 CCDC70Q6NSX1 233 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 ZNF662Q6ZS27 426 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 SLC35F3Q8IY50 421 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 CCL4L1Q8NHW4 92 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 CCHCR1Q8TD31 782 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 PTCD2Q8WV60 388 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 SCG3Q8WXD2 468 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 COX14Q96I36 57 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 MRGPRX2Q96LB1 330 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 ZFYVE1Q9HBF4 777 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 NCKIPSDQ9NZQ3 722 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 KLHL8Q9P2G9 620 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 SHOC2Q9UQ13 582 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 TMEM98Q9Y2Y6 226 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 CAPN6Q9Y6Q1 641 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 RP1P56715 2156 aa16.07■□□□□ 0.16
PDLIM5-216ENST00000511767 CPED1A4D0V7 1026 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 PYGLP06737 847 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 PIRTP0C851 137 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 TARDBPQ13148 414 aaKnown RBP eCLIP16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 NR0B2Q15466 257 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 CDCP2Q5VXM1 449 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 DARS2Q6PI48 645 aaKnown RBP16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 LYSMD3Q7Z3D4 306 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 GKN2Q86XP6 184 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 CCDC112Q8NEF3 446 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 GPBAR1Q8TDU6 330 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 HIC2Q96JB3 615 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 FAM118BQ9BPY3 351 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 TRNAU1APQ9NX07 287 aaKnown RBP16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 GULP1Q9UBP9 304 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 MOSPD1Q9UJG1 213 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 PADI4Q9UM07 663 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 GUCA1BQ9UMX6 200 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 SPO11Q9Y5K1 396 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 ST14Q9Y5Y6 855 aa16.06■□□□□ 0.16
PDLIM5-216ENST00000511767 PRSS38A1L453 326 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 GOLGA6CA6NDK9 693 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 GOLGA6BA6NDN3 693 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 TAF4O00268 1085 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 AURKAO14965 403 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 KRT86O43790 486 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 MT-CO3P00414 261 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 IVLP07476 585 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 GOLGA6DP0CG33 693 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 RPIAP49247 311 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 KLF1Q13351 362 aaPredicted RBP16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 TCEA2Q15560 299 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 ANKRD20A2Q5SQ80 823 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 HENMT1Q5T8I9 393 aaKnown RBP16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 HES3Q5TGS1 186 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 ANKRD20A1Q5TYW2 823 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 ANKRD20A3Q5VUR7 823 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 GUSBP11Q6P575 273 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 EFL1Q7Z2Z2 1120 aaKnown RBP16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 TAF8Q7Z7C8 310 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 NRROSQ86YC3 692 aa16.05■□□□□ 0.16
PDLIM5-216ENST00000511767 DCBLD1Q8N8Z6 715 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms