RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 INSL5Q9Y5Q6 135 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 UBIAD1Q9Y5Z9 338 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 MN1Q10571 1320 aaPredicted RBP5.7□□□□□ -1.5
GYPB-212ENST00000511198 PRRC2CQ9Y520 2896 aaKnown RBP5.69□□□□□ -1.5
GYPB-212ENST00000511198 A0A087WZ62 844 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 A0A1B0GVT2 93 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 A0A1W2PNU3 283 aaPredicted RBP5.69□□□□□ -1.5
GYPB-212ENST00000511198 A0A1W2PPL8 197 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 TCRBV21S2A2A0A5A6 115 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 DHX16O60231 1041 aaKnown RBP5.69□□□□□ -1.5
GYPB-212ENST00000511198 SYNCRIPO60506 623 aaKnown RBP5.69□□□□□ -1.5
GYPB-212ENST00000511198 LDOC1O95751 146 aaPredicted RBP5.69□□□□□ -1.5
GYPB-212ENST00000511198 MT-CO3P00414 261 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 KRT7P08729 469 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 PRR35P0CG20 571 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 GABRG2P18507 467 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 HOXA11P31270 313 aaPredicted RBP5.69□□□□□ -1.5
GYPB-212ENST00000511198 MLLT10P55197 1068 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 TUBA4AP68366 448 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 IL9RQ01113 521 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 TWF1Q12792 350 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 ITGB3BPQ13352 177 aaPredicted RBP5.69□□□□□ -1.5
GYPB-212ENST00000511198 SLC35G1Q2M3R5 365 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 KIF19Q2TAC6 998 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 WDR45BQ5MNZ6 344 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 SYCP2LQ5T4T6 812 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 ZNF425Q6IV72 752 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 NAPRTQ6XQN6 538 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 ZNF783Q6ZMS7 281 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 LEMD2Q8NC56 503 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 ENGASEQ8NFI3 743 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 OR6B3Q8NGW1 331 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 XAGE5Q8WWM1 108 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 CDHR1Q96JP9 859 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 TTC14Q96N46 770 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 SCLT1Q96NL6 688 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 MMS19Q96T76 1030 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 FUCA2Q9BTY2 467 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 B3GNT5Q9BYG0 378 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 GCOM2Q9BZD3 368 aaPredicted RBP5.69□□□□□ -1.5
GYPB-212ENST00000511198 TMEM245Q9H330 911 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 ASAH2Q9NR71 780 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 NOB1Q9ULX3 412 aaKnown RBP5.69□□□□□ -1.5
GYPB-212ENST00000511198 HES2Q9Y543 173 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 SLCO1B1Q9Y6L6 691 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 NOTCH1P46531 2555 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 ACANP16112 2415 aa5.69□□□□□ -1.5
GYPB-212ENST00000511198 CUBNO60494 3623 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 UQCRHLA0A096LP55 91 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 ARHGAP10A1A4S6 786 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 TMEM233B4DJY2 109 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 PRRT4C9JH25 899 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 ADAMTS3O15072 1205 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 MAGEB2O15479 319 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 NADKO95544 446 aaPredicted RBP5.68□□□□□ -1.5
GYPB-212ENST00000511198 KLF8O95600 359 aaPredicted RBP5.68□□□□□ -1.5
GYPB-212ENST00000511198 UQCRHP07919 91 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 NPSP0C0P6 89 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 SFPQP23246 707 aaKnown RBP eCLIP5.68□□□□□ -1.5
GYPB-212ENST00000511198 ELF1P32519 619 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 HOXA4Q00056 320 aaPredicted RBP5.68□□□□□ -1.5
GYPB-212ENST00000511198 ST3GAL1Q11201 340 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 MGAT5BQ3V5L5 792 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 DCAF6Q58WW2 860 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 MTX3Q5HYI7 312 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 SWSAP1Q6NVH7 229 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 USP17L6PQ6QN14 398 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 CASC1Q6TDU7 716 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 CATSPER4Q7RTX7 472 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 CHSY1Q86X52 802 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 MCEMP1Q8IX19 187 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 SLC34A3Q8N130 599 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 ENAHQ8N8S7 591 aaPredicted RBP5.68□□□□□ -1.5
GYPB-212ENST00000511198 OSCP1Q8WVF1 389 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 MAML1Q92585 1016 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 SYAP1Q96A49 352 aaPredicted RBP5.68□□□□□ -1.5
GYPB-212ENST00000511198 CNDP2Q96KP4 475 aaKnown RBP5.68□□□□□ -1.5
GYPB-212ENST00000511198 LENG8Q96PV6 779 aaPredicted RBP5.68□□□□□ -1.5
GYPB-212ENST00000511198 EIF2AQ9BY44 585 aaKnown RBP5.68□□□□□ -1.5
GYPB-212ENST00000511198 POLR1BQ9H9Y6 1135 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 UBN1Q9NPG3 1134 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 THSD1Q9NS62 852 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 AGPAT5Q9NUQ2 364 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 CCL26Q9Y258 94 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 SNX14Q9Y5W7 946 aa5.68□□□□□ -1.5
GYPB-212ENST00000511198 ZBTB5O15062 677 aa5.67□□□□□ -1.5
GYPB-212ENST00000511198 BCAT2O15382 392 aaPredicted RBP5.67□□□□□ -1.5
GYPB-212ENST00000511198 PHGDHO43175 533 aaKnown RBP5.67□□□□□ -1.5
GYPB-212ENST00000511198 PAPSS1O43252 624 aaPredicted RBP5.67□□□□□ -1.5
GYPB-212ENST00000511198 HNRNPRO43390 633 aaKnown RBP5.67□□□□□ -1.5
GYPB-212ENST00000511198 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
GYPB-212ENST00000511198 USP12O75317 370 aa5.67□□□□□ -1.5
GYPB-212ENST00000511198 PARP1P09874 1014 aaKnown RBP5.67□□□□□ -1.5
GYPB-212ENST00000511198 KELP23276 732 aa5.67□□□□□ -1.5
GYPB-212ENST00000511198 TMOD1P28289 359 aa5.67□□□□□ -1.5
GYPB-212ENST00000511198 EPHB2P29323 1055 aa5.67□□□□□ -1.5
GYPB-212ENST00000511198 MPGP29372 298 aa5.67□□□□□ -1.5
GYPB-212ENST00000511198 OPRD1P41143 372 aa5.67□□□□□ -1.5
GYPB-212ENST00000511198 CSNK1EP49674 416 aaKnown RBP5.67□□□□□ -1.5
GYPB-212ENST00000511198 TPTEP56180 551 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms