RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 TMEM110-MUSTN1A8MSY1 372 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 D6RAR5 112 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 BIN1O00499 593 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 SUV39H1O43463 412 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 KDELR3O43731 214 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 UGT2B4P06133 528 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 ALPIP09923 528 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 CYP11B1P15538 503 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 ADRA1BP35368 520 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 MAPKAPK2P49137 400 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 INHBCP55103 352 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 CCL7P80098 99 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 ZFP36L1Q07352 338 aaKnown RBP8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 POLD3Q15054 466 aaPredicted RBP8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 PLCL1Q15111 1095 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 ELOCQ15369 112 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 TMEM52BQ4KMG9 183 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 SFRP5Q5T4F7 317 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 FAM102AQ5T9C2 384 aaPredicted RBP8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 PRAMEF13Q5VWM6 474 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 SLC6A19Q695T7 634 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 LETMD1Q6P1Q0 360 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 VPS36Q86VN1 386 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 FAM131BQ86XD5 332 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 MRPL41Q8IXM3 137 aaKnown RBP8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 DRC7Q8IY82 874 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 OR6K2Q8NGY2 324 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 HCAR2Q8TDS4 363 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 SGF29Q96ES7 293 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 GFM1Q96RP9 751 aaKnown RBP8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 C1QTNF7Q9BXJ2 289 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 EDEM3Q9BZQ6 932 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 MAGEH1Q9H213 219 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 TMEM248Q9NWD8 314 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 OR12D3Q9UGF7 316 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 APPL1Q9UKG1 709 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 NEU3Q9UQ49 428 aa8.68□□□□□ -1.02
COL4A3BP-206ENST00000508809 ZSCAN5CA6NGD5 496 aaPredicted RBP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 KRIT1O00522 736 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 LSM8O95777 96 aaKnown RBP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 PNMA6AP0CW24 399 aaPredicted RBP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 SFTPCP11686 197 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 PNLIPP16233 465 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 SUOXP51687 545 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 CLCN7P51798 805 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 NFATC3Q12968 1075 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 TGIF1Q15583 401 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 NKG7Q16617 165 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 KLHL40Q2TBA0 621 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 WSCD2Q2TBF2 565 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 INO80DQ53TQ3 878 aaPredicted RBP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 GDPD4Q6W3E5 623 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 BNC2Q6ZN30 1099 aaPredicted RBP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 USP53Q70EK8 1073 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 GKN2Q86XP6 184 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 RYBPQ8N488 228 aaPredicted RBP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 KYQ8NBH2 561 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 GPR156Q8NFN8 814 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 CXorf40AQ8TE69 158 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 CASKIN2Q8WXE0 1202 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 ASB11Q8WXH4 323 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 CENPIQ92674 756 aaPredicted RBP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 EXTL1Q92935 676 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 TSACCQ96A04 125 aaPredicted RBP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 TMEM159Q96B96 161 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 RHOVQ96L33 236 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 CFAP57Q96MR6 1250 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 APOOQ9BUR5 198 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 CPEB1Q9BZB8 566 aaKnown RBP8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 FOXP3Q9BZS1 431 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 TTYH3Q9C0H2 523 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 B3GNT4Q9C0J1 378 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 STRADBQ9C0K7 418 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 LRRN3Q9H3W5 708 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 GULP1Q9UBP9 304 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 DNAI1Q9UI46 699 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 HPCAL4Q9UM19 191 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 DGKBQ9Y6T7 804 aa8.67□□□□□ -1.02
COL4A3BP-206ENST00000508809 SDK2Q58EX2 2172 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 FAM72CH0Y354 149 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 SLITRK5O94991 958 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 RASGRP1O95267 797 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 RPLP0P05388 317 aaKnown RBP8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 LIPCP11150 499 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 CTSEP14091 401 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 HGFP14210 728 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 ZNF16P17020 682 aaPredicted RBP8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 ETV3P41162 512 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 NOMO3P69849 1222 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 RAD51Q06609 339 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 SRSF6Q13247 344 aaKnown RBP8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 IRF4Q15306 451 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 ALG11Q2TAA5 492 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 CCDC14Q49A88 953 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 RAB6CQ53S08 254 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 C2CD6Q53TS8 623 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 ATXN7L2Q5T6C5 722 aaPredicted RBP8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 FAM72AQ5TYM5 149 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 FAM72DQ6L9T8 149 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms