RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 KLHL22Q53GT1 634 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 SETMARQ53H47 684 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 PLEKHS1Q5SXH7 462 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 HMBOX1Q6NT76 420 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 UNC5DQ6UXZ4 953 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 KIF6Q6ZMV9 814 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 RRAGAQ7L523 313 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 GALNT7Q86SF2 657 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 CCDC83Q8IWF9 413 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 CCDC105Q8IYK2 499 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ZNF619Q8N2I2 560 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 TRIML1Q8N9V2 468 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 SPC24Q8NBT2 197 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 OR52L2PQ8NGH6 319 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 CPT1BQ92523 772 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 C3orf49Q96BT1 292 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ZNF653Q96CK0 615 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ZNF274Q96GC6 653 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 APOPT1Q96IL0 206 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 CCDC43Q96MW1 224 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 GPR78Q96P69 363 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 PIGSQ96S52 555 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 FUCA2Q9BTY2 467 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ELOVL1Q9BW60 279 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 IL25Q9H293 177 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 TNMDQ9H2S6 317 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 CDCP1Q9H5V8 836 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 MRPL44Q9H9J2 332 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 CHODLQ9H9P2 273 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 PAPOLBQ9NRJ5 636 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 RXFP3Q9NSD7 469 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 PAG1Q9NWQ8 432 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 HPF1Q9NWY4 346 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 DCAF16Q9NXF7 216 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 HSF4Q9ULV5 492 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 NAP1L2Q9ULW6 460 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ATP6V0A2Q9Y487 856 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 NUP98P52948 1817 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 PHLPP1O60346 1717 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 KIAA1551Q9HCM1 1747 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 NWD2Q9ULI1 1742 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 MAST2Q6P0Q8 1798 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 STRCQ7RTU9 1775 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 DUOX1Q9NRD9 1551 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 EFCAB8A8MWE9 144 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 KIF2AO00139 706 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 PRPF4O43172 522 aaKnown RBP eCLIP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 KINO60870 393 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 CNOT3O75175 753 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 GUCY1B2O75343 617 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 SLC22A3O75751 556 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 KRT38O76015 456 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 SLU7O95391 586 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 NFATC1O95644 943 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 ATP5BP06576 529 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 MYL6BP14649 208 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 SLC5A2P31639 672 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 THPOP40225 353 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 HADHAP40939 763 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 RCAN1P53805 252 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 HSD17B7P56937 341 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 KRTAP10-9P60411 292 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 RPS3AP61247 264 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 TPM4P67936 248 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 AIMP1Q12904 312 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 ZRSR1Q15695 479 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 INPP5JQ15735 1006 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 ADIPOQQ15848 244 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 IMMTQ16891 758 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 CCDC57Q2TAC2 916 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 MIDNQ504T8 468 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 GLE1Q53GS7 698 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 ANKRD40Q6AI12 368 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 ALKBH5Q6P6C2 394 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 CCDC73Q6ZRK6 1079 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 FAM83HQ6ZRV2 1179 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 RASGRP3Q8IV61 690 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 KIAA2013Q8IYS2 634 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 MOSPD2Q8NHP6 518 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 METTL6Q8TCB7 284 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 KCNG4Q8TDN1 519 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 N4BP2L2Q92802 583 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 FNBP1Q96RU3 617 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 ZPBPQ9BS86 351 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 RNF26Q9BY78 433 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 DNAI2Q9GZS0 605 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 BOLA2Q9H3K6 86 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 CLSTN2Q9H4D0 955 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.45□□□□□ -1.73e-9■■□□□ 14
CALCOCO2-208ENST00000506971 HCFC1R1Q9NWW0 138 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 TBK1Q9UHD2 729 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 BLOC1S6Q9UL45 172 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 RABL2BQ9UNT1 228 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 CAMK2AQ9UQM7 478 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 PCDHB7Q9Y5E2 793 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 FAM169AQ9Y6X4 670 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 C4AP0C0L4 1744 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 C4BP0C0L5 1744 aa4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-208ENST00000506971 AHDC1Q5TGY3 1603 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms