RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TAF8Q7Z7C8 310 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 GKN2Q86XP6 184 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 RFX6Q8HWS3 928 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 SNIP1Q8TAD8 396 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 ABCG4Q9H172 646 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 PRORYQ9H606 182 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 SYNDIG1Q9H7V2 258 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 CARS2Q9HA77 564 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 PCDH9Q9HC56 1237 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 GOLGA6AQ9NYA3 693 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 ATXN7L1Q9ULK2 861 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 SUFUQ9UMX1 484 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 DOLKQ9UPQ8 538 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 REXO2Q9Y3B8 237 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 OAS3Q9Y6K5 1087 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 RNF215Q9Y6U7 377 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 PTPRQQ9UMZ3 2332 aa16.68■□□□□ 0.26
PDLIM7-215ENST00000506161 SOWAHDA6NJG2 315 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 FADS2P1A8MWK0 482 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 ZNF487B1APH4 448 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 J3QKU1 62 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 AGRPO00253 132 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 TPM1P09493 284 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 PIRTP0C851 137 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 MAGEA1P43355 309 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 GNPDA1P46926 289 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 ZNF75DP51815 510 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 DPTQ07507 201 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 TSR1Q2NL82 804 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 LRRC69Q6ZNQ3 347 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 KDELC2Q7Z4H8 507 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 FAM46DQ8NEK8 389 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 SPATA22Q8NHS9 363 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 GPBAR1Q8TDU6 330 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 KRT35Q92764 455 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 TADA1Q96BN2 335 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 NAF1Q96HR8 494 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 RIOK2Q9BVS4 552 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 FOXP3Q9BZS1 431 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 INTUQ9ULD6 942 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 CNOT6Q9ULM6 557 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 SLC17A4Q9Y2C5 497 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 ALG6Q9Y672 507 aa16.67■□□□□ 0.26
PDLIM7-215ENST00000506161 A0A0U1RQJ8 604 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 INPP4BO15327 924 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 EML2O95834 649 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 MT-CYBP00156 380 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 FGF1P05230 155 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 CD68P34810 354 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 GPR1P46091 355 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 HADHBP55084 474 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 CCDC173Q0VFZ6 552 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 AP1B1Q10567 949 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 HLTFQ14527 1009 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 NOMO1Q15155 1222 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 LRRC38Q5VT99 294 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 RBM44Q6ZP01 1051 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 RHOT1Q8IXI2 618 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 Q8N9G6 341 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 NAT6Q93015 286 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 AP2M1Q96CW1 435 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 COX14Q96I36 57 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 HIC2Q96JB3 615 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 AGAP3Q96P47 875 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 POLR1BQ9H9Y6 1135 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 PHPT1Q9NRX4 125 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 SEPT10Q9P0V9 454 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 AMACRQ9UHK6 382 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 PRKAB1Q9Y478 270 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 PCDHA13Q9Y5I0 950 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
PDLIM7-215ENST00000506161 ZNF106Q9H2Y7 1883 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 F5H423 210 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 RPLP0P05388 317 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 MX2P20592 715 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 FECHP22830 423 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 TEAD1P28347 426 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 ADCY8P40145 1251 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 LSSP48449 732 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 RPIAP49247 311 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 EPHB1P54762 984 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 CTBSQ01459 385 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 WASHC5Q12768 1159 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 PRKD1Q15139 912 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 CERCAMQ5T4B2 595 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 ZNF648Q5T619 568 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 KAZNQ674X7 775 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 ADAMTSL4Q6UY14 1074 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 RAD9BQ6WBX8 426 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 SPOCD1Q6ZMY3 1216 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 MARK2Q7KZI7 788 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 LYSMD3Q7Z3D4 306 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 C17orf82Q86X59 251 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 VSIG1Q86XK7 387 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 ATL2Q8NHH9 583 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 FGF11Q92914 225 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 GLMNQ92990 594 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 HAUS1Q96CS2 278 aa16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 IMP4Q96G21 291 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-215ENST00000506161 SCARF2Q96GP6 870 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms