RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CRNNQ9UBG3 495 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 NDRG3Q9UGV2 375 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 FBXW11Q9UKB1 542 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 KLHL20Q9Y2M5 609 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 A0A0U1RQF3 1178 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 EDDM13A0A1B0GTR0 161 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 A0A1W2PR77 199 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 DDTLA6NHG4 134 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 H0YAE9 185 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 FMO6PO60774 539 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 NEURL1O76050 574 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 MMP2P08253 660 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 MMP3P08254 477 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 TFPIP10646 304 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 CASTP20810 708 aaKnown RBP3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 ACADLP28330 430 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 HOXA7P31268 230 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 NPY4RP50391 375 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 SUOXP51687 545 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 CLCN5P51795 746 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 BMXP51813 675 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 CAPZA1P52907 286 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 YWHAHQ04917 246 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF674Q2M3X9 581 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 TTC31Q49AM3 519 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 CBWD6Q4V339 395 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 AWAT1Q58HT5 328 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 CBWD3Q5JTY5 395 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 TTC39AQ5SRH9 613 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 LRIF1Q5T3J3 769 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 SUSD1Q6UWL2 747 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 QSOX2Q6ZRP7 698 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 DENND6AQ8IWF6 608 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZBTB2Q8N680 514 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 CAMKVQ8NCB2 501 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 MOSPD2Q8NHP6 518 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 TRPC4APQ8TEL6 797 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 TEKT4Q8WW24 435 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 KAT2AQ92830 837 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 ERO1AQ96HE7 468 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF333Q96JL9 665 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF570Q96NI8 536 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 CDRT15Q96T59 188 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 SYT17Q9BSW7 474 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 FUT8Q9BYC5 575 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 SPATC1LQ9H0A9 340 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 RNF146Q9NTX7 359 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 PAG1Q9NWQ8 432 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 SYBUQ9NX95 663 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 ANKRD10Q9NXR5 420 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 DDX43Q9NXZ2 648 aaKnown RBP3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 UBA2Q9UBT2 640 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 DNAJB4Q9UDY4 337 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 WBP11Q9Y2W2 641 aaKnown RBP3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 WNT6Q9Y6F9 365 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 A3GALT2U3KPV4 340 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 COL4A3Q01955 1670 aa3.94□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF335Q9H4Z2 1342 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 TRBV5-7A0A0A0MS05 114 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 C1orf226A1L170 272 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 GRID2IPA4D2P6 1211 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 MAGEB17A8MXT2 336 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 FOXO6A8MYZ6 492 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 H3BQ06 376 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 CCDC188H7C350 402 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 TRUB2O95900 331 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 UNGP13051 313 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 HLA-DPA1P20036 260 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 PSMA3P25788 255 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 AMPHP49418 695 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 GPR143P51810 404 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 HSF1Q00613 529 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 ECT2LQ008S8 904 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 GRSF1Q12849 480 aaKnown RBP eCLIP3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 PTK6Q13882 451 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 KRT33BQ14525 404 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF273Q14593 569 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 ARHGEF6Q15052 776 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 SMU1Q2TAY7 513 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 C2orf76Q3KRA6 126 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 SGO1Q5FBB7 561 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 PRAMEF19Q5SWL8 479 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 MPP7Q5T2T1 576 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 TSTD2Q5T7W7 516 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 PLEKHA7Q6IQ23 1121 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 OLFML1Q6UWY5 402 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 UBE2Q1Q7Z7E8 422 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 SDCCAG8Q86SQ7 713 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 NOXA1Q86UR1 476 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 HAPLN4Q86UW8 402 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 ADGRF4Q8IZF3 695 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 SIX6OS1Q8N1H7 587 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 CMASQ8NFW8 434 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 OR10S1Q8NGN2 331 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 KCNE4Q8WWG9 221 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 IGSF8Q969P0 613 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 SNX21Q969T3 373 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 MGME1Q9BQP7 344 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 MMADHCQ9H3L0 296 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 OLAHQ9NV23 265 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms