RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 LYSMD3Q7Z3D4 306 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 TECPR1Q7Z6L1 1165 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 TMEM139Q8IV31 216 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 EXD1Q8NHP7 514 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 IMP4Q96G21 291 aaKnown RBP14.21□□□□□ -0.13
HOXC9-202ENST00000504557 DPEP2Q9H4A9 486 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 GLOD4Q9HC38 313 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 KCTD5Q9NXV2 234 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 PACSIN2Q9UNF0 486 aaPredicted RBP14.21□□□□□ -0.13
HOXC9-202ENST00000504557 PPIL1Q9Y3C6 166 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 PCDHB1Q9Y5F3 818 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 APC2O95996 2303 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 URB1O60287 2271 aaKnown RBP14.2□□□□□ -0.14
HOXC9-202ENST00000504557 KMT2BQ9UMN6 2715 aaPredicted RBP14.2□□□□□ -0.14
HOXC9-202ENST00000504557 GRID2IPA4D2P6 1211 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 EME2A4GXA9 379 aaPredicted RBP14.2□□□□□ -0.14
HOXC9-202ENST00000504557 ANKRD66B4E2M5 251 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 AGRPO00253 132 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 CSO75390 466 aaKnown RBP14.2□□□□□ -0.14
HOXC9-202ENST00000504557 NFKB1P19838 968 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 CTNNA2P26232 953 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 CDC25BP30305 580 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 CTNNA1P35221 906 aaKnown RBP14.2□□□□□ -0.14
HOXC9-202ENST00000504557 TAZQ16635 292 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 PID1Q7Z2X4 250 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 CBARPQ8N350 705 aaPredicted RBP14.2□□□□□ -0.14
HOXC9-202ENST00000504557 ARL10Q8N8L6 244 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 CCHCR1Q8TD31 782 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 CCDC74AQ96AQ1 378 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 NXPE2Q96DL1 559 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 TBATAQ96M53 351 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 DCBLD2Q96PD2 775 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 CCDC3Q9BQI4 270 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 HERPUD2Q9BSE4 406 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 TEX101Q9BY14 249 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 SLC25A51Q9H1U9 297 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 USP29Q9HBJ7 922 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 ARFGAP3Q9NP61 516 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 PKD2L2Q9NZM6 624 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 NCKIPSDQ9NZQ3 722 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 IMPACTQ9P2X3 320 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 SUFUQ9UMX1 484 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 RAXQ9Y2V3 346 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 GPSM3Q9Y4H4 160 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 DGKBQ9Y6T7 804 aa14.2□□□□□ -0.14
HOXC9-202ENST00000504557 COL27A1Q8IZC6 1860 aaPredicted RBP14.2□□□□□ -0.14
HOXC9-202ENST00000504557 ASPMQ8IZT6 3477 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 TNFRSF10CO14798 259 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 FTCDO95954 541 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 SOD1P00441 154 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 FUCA1P04066 466 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 ATP1A1P05023 1023 aaKnown RBP14.19□□□□□ -0.14
HOXC9-202ENST00000504557 CEACAM5P06731 702 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 GP1BAP07359 652 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 AK4P27144 223 aaPredicted RBP14.19□□□□□ -0.14
HOXC9-202ENST00000504557 RWDD2BP57060 319 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 RPL26P61254 145 aaKnown RBP14.19□□□□□ -0.14
HOXC9-202ENST00000504557 CDK18Q07002 472 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 WASHC5Q12768 1159 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 KIF5AQ12840 1032 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 NOMO1Q15155 1222 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 CCDC70Q6NSX1 233 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 FOXR1Q6PIV2 292 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 SLC30A9Q6PML9 568 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 BBS12Q6ZW61 710 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 PEX26Q7Z412 305 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 PROSER1Q86XN7 944 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 SLC25A41Q8N5S1 370 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 Q8N9G6 341 aaPredicted RBP14.19□□□□□ -0.14
HOXC9-202ENST00000504557 HIC2Q96JB3 615 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 TEKT5Q96M29 485 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 DEPDC7Q96QD5 511 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 FRMD8Q9BZ67 464 aaPredicted RBP14.19□□□□□ -0.14
HOXC9-202ENST00000504557 GPR63Q9BZJ6 419 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 RSPH14Q9UHP6 348 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 DNPEPQ9ULA0 475 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 RPL26L1Q9UNX3 145 aaKnown RBP14.19□□□□□ -0.14
HOXC9-202ENST00000504557 PRKAB1Q9Y478 270 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 PLEKHM1Q9Y4G2 1056 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 PCDHA3Q9Y5H8 950 aa14.19□□□□□ -0.14
HOXC9-202ENST00000504557 WDFY3Q8IZQ1 3526 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 ADAMTS20P59510 1910 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 CCDC66A2RUB6 948 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 USP12O75317 370 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 HOXC4P09017 264 aaPredicted RBP14.18□□□□□ -0.14
HOXC9-202ENST00000504557 RBL1P28749 1068 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 CD68P34810 354 aaPredicted RBP14.18□□□□□ -0.14
HOXC9-202ENST00000504557 TNNT3P45378 269 aaPredicted RBP14.18□□□□□ -0.14
HOXC9-202ENST00000504557 SPINT3P49223 89 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 OTUD4Q01804 1114 aaKnown RBP14.18□□□□□ -0.14
HOXC9-202ENST00000504557 DPTQ07507 201 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 ILF3Q12906 894 aaKnown RBP eCLIP14.18□□□□□ -0.14
HOXC9-202ENST00000504557 BIRC2Q13490 618 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 PPP2R5EQ16537 467 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 LVRNQ6Q4G3 990 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 C19orf48Q6RUI8 117 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 ZNF567Q8N184 647 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 SDR16C5Q8N3Y7 309 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 DCBLD1Q8N8Z6 715 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 IPMKQ8NFU5 416 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms