RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 KLHL30Q0D2K2 578 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 SRSF6Q13247 344 aaKnown RBP12□□□□□ -0.49
CNOT4-211ENST00000498534 NR1D2Q14995 579 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 NCAPHQ15003 741 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 DPYSL2Q16555 572 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 TBR1Q16650 682 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 ZNF574Q6ZN55 896 aaPredicted RBP12□□□□□ -0.49
CNOT4-211ENST00000498534 ATG14Q6ZNE5 492 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 CYP4V2Q6ZWL3 525 aaPredicted RBP12□□□□□ -0.49
CNOT4-211ENST00000498534 ZNF571Q7Z3V5 609 aaPredicted RBP12□□□□□ -0.49
CNOT4-211ENST00000498534 POLNQ7Z5Q5 900 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 LRRC49Q8IUZ0 686 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 TP53INP2Q8IXH6 220 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 ATPAF2Q8N5M1 289 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 AOPEPQ8N6M6 819 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 AGBL5Q8NDL9 886 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 HSPH1Q92598 858 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 ZNF653Q96CK0 615 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 NUDT22Q9BRQ3 303 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 ASPSCR1Q9BZE9 553 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 CDH19Q9H159 772 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 IL17BQ9UHF5 180 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 SLC17A4Q9Y2C5 497 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 BOD1L1Q8NFC6 3051 aa12□□□□□ -0.49
CNOT4-211ENST00000498534 SMTNL1A8MU46 457 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 PGLSO95336 258 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 PEX11BO96011 259 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 PYGLP06737 847 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 TRAF2Q12933 501 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 SQSTM1Q13501 440 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 PIGHQ14442 188 aaPredicted RBP11.99□□□□□ -0.49
CNOT4-211ENST00000498534 NKAIN2Q5VXU1 208 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 DOK6Q6PKX4 331 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 NLRP8Q86W28 1048 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 PGBD5Q8N414 524 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 IL22RA1Q8N6P7 574 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 RCBTB1Q8NDN9 531 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 OR4D9Q8NGE8 314 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 JPH3Q8WXH2 748 aaPredicted RBP11.99□□□□□ -0.49
CNOT4-211ENST00000498534 AP2M1Q96CW1 435 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 AHCYL2Q96HN2 611 aaKnown RBP11.99□□□□□ -0.49
CNOT4-211ENST00000498534 CCDC74BQ96LY2 380 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 CSPG4P5Q96PW8 444 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 MGME1Q9BQP7 344 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 HSD3B7Q9H2F3 369 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 STARD5Q9NSY2 213 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.99□□□□□ -0.49
CNOT4-211ENST00000498534 HAUS2Q9NVX0 235 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 KCNK4Q9NYG8 393 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 PPIL1Q9Y3C6 166 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 PCDHGA3Q9Y5H0 932 aa11.99□□□□□ -0.49
CNOT4-211ENST00000498534 TLN1Q9Y490 2541 aaKnown RBP11.98□□□□□ -0.49
CNOT4-211ENST00000498534 NPIPB15A6NHN6 443 aaPredicted RBP11.98□□□□□ -0.49
CNOT4-211ENST00000498534 DDX3XO00571 662 aaKnown RBP eCLIP11.98□□□□□ -0.49
CNOT4-211ENST00000498534 PPM1DO15297 605 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 RARAP10276 462 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 FGF3P11487 239 aaPredicted RBP11.98□□□□□ -0.49
CNOT4-211ENST00000498534 CTPS1P17812 591 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 LHCGRP22888 699 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 CES1P23141 567 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 IL1R2P27930 398 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 PRKCIP41743 596 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 ACTR1BP42025 376 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 EPHB1P54762 984 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 ACTR1AP61163 376 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 MAXP61244 160 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 CYP4F2P78329 520 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 GPLD1P80108 840 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 SMTNL2Q2TAL5 461 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 CCDC122Q5T0U0 273 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 ADAMTSL4Q6UY14 1074 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 TECPR1Q7Z6L1 1165 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 TSPAN33Q86UF1 283 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 NAGSQ8N159 534 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 PATE1Q8WXA2 126 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 NKD1Q969G9 470 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 SCARF2Q96GP6 870 aaPredicted RBP11.98□□□□□ -0.49
CNOT4-211ENST00000498534 OR2M4Q96R27 311 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 MCCC1Q96RQ3 725 aaPredicted RBP11.98□□□□□ -0.49
CNOT4-211ENST00000498534 ZMYND15Q9H091 742 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 ISCUQ9H1K1 167 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 ABCG8Q9H221 673 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 NT5MQ9NPB1 228 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 ETNK2Q9NVF9 386 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 SLC39A1Q9NY26 324 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 TMEM98Q9Y2Y6 226 aa11.98□□□□□ -0.49
CNOT4-211ENST00000498534 TRBV23OR9-2A0A075B6M9 112 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 IGHV1OR21-1A0A087WYE8 117 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 ARHGAP6O43182 974 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 PPFIA2O75334 1257 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 ASMTLO95671 621 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 SKILP12757 684 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 ZNF30P17039 623 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 ITGB6P18564 788 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 MPSTP25325 297 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 TYRO3Q06418 890 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 LRP8Q14114 963 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 KRT81Q14533 505 aa11.97□□□□□ -0.49
CNOT4-211ENST00000498534 PTPRRQ15256 657 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms