RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ENO3P13929 434 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-220ENST00000496711 FMO4P31512 558 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 EPHB3P54753 998 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 RAD51Q06609 339 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 NCEH1Q6PIU2 408 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 DNAJB7Q7Z6W7 309 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-220ENST00000496711 TMEM150AQ86TG1 271 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 KBTBD2Q8IY47 623 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 EFHBQ8N7U6 833 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 SMIM14Q96QK8 99 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 MYCBPQ99417 103 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-220ENST00000496711 ZBED2Q9BTP6 218 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 WDR41Q9HAD4 459 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 SAGE1Q9NXZ1 904 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 FKBPLQ9UIM3 349 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 PTPRSQ13332 1948 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 CCDC189A1A4V9 331 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 LCHNA4D1U4 455 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 PYGLP06737 847 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 MTHFD2P13995 350 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 LAG3P18627 525 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 TSPAN8P19075 237 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 MZF1P28698 734 aaPredicted RBP13□□□□□ -0.33
GARNL3-220ENST00000496711 MC4RP32245 332 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 TTPAP49638 278 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 ATP6V0D1P61421 351 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 RHOAP61586 193 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 ART3Q13508 389 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 INO80DQ53TQ3 878 aaPredicted RBP13□□□□□ -0.33
GARNL3-220ENST00000496711 PIGGQ5H8A4 983 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 CLEC6AQ6EIG7 209 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 ANO7Q6IWH7 933 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 PSAPL1Q6NUJ1 521 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 PAQR3Q6TCH7 311 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 GK5Q6ZS86 529 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 TCEAL8Q8IYN2 117 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 TOP1MTQ969P6 601 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 KIAA1191Q96A73 305 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 ZNF689Q96CS4 500 aaPredicted RBP13□□□□□ -0.33
GARNL3-220ENST00000496711 ZNF334Q9HCZ1 680 aaPredicted RBP13□□□□□ -0.33
GARNL3-220ENST00000496711 HACD3Q9P035 362 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 TBX21Q9UL17 535 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 FAM50BQ9Y247 325 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 MED16Q9Y2X0 877 aa13□□□□□ -0.33
GARNL3-220ENST00000496711 OAS3Q9Y6K5 1087 aaKnown RBP13□□□□□ -0.33
GARNL3-220ENST00000496711 SUPT3HB4E1H0 165 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 SCAMP3O14828 347 aaKnown RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 STX7O15400 261 aaKnown RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 VPS26AO75436 327 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 SUPT3HO75486 399 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 OLFM2O95897 454 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 GFAPP14136 432 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 ARSAP15289 507 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 THOP1P52888 689 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 CDH18Q13634 790 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 FASTKQ14296 549 aaKnown RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 PPP1R3AQ16821 1122 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 PTPRNQ16849 979 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 PFKFB4Q16877 469 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 SETMARQ53H47 684 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 AARS2Q5JTZ9 985 aaKnown RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 IRGCQ6NXR0 463 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 IZUMO2Q6UXV1 221 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 DDX53Q86TM3 631 aaKnown RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 ITIH5Q86UX2 942 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 CLYBLQ8N0X4 340 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 TTC30BQ8N4P2 665 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 HIPK4Q8NE63 616 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 STAG3L4Q8TBR4 150 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 C19orf60Q96EN9 201 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 SLC22A12Q96S37 553 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 CDRT15Q96T59 188 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 GPR21Q99679 349 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 FEM1AQ9BSK4 669 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 CXorf56Q9H5V9 222 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 RC3H2Q9HBD1 1191 aaKnown RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 VPS51Q9UID3 782 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 RNF112Q9ULX5 631 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 H7C0S8 307 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 PSMD12O00232 456 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 GPC4O75487 556 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 SIX3O95343 332 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 PKMP14618 531 aaKnown RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 RAG1P15918 1043 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 RFC2P35250 354 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 CSKP41240 450 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 CDKN1CP49918 316 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 ATP4BP51164 291 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 CDH13P55290 713 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 MRPS35P82673 323 aaKnown RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 KLC1Q07866 573 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 PTK2BQ14289 1009 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 ZNF423Q2M1K9 1284 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 FAM117BQ6P1L5 589 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 CYHR1Q6ZMK1 362 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 Q6ZNB5 142 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 TMCO2Q7Z6W1 182 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-220ENST00000496711 KBTBD6Q86V97 674 aa12.99□□□□□ -0.33
GARNL3-220ENST00000496711 MFN1Q8IWA4 741 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms