RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 NOTCH3Q9UM47 2321 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 A0A1W2PRQ8 180 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 FAM170AA1A519 330 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 A8MV72 311 aaPredicted RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 CDRT15L2A8MXV6 281 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 SH2B2O14492 632 aaPredicted RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 ACOT8O14734 319 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 TIMM23O14925 209 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 PAPSS1O43252 624 aaPredicted RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 GRID2O43424 1007 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 HCRTR2O43614 444 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 TPPPO94811 219 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 MMP3P08254 477 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 MYZAPP0CAP1 466 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 NR2F1P10589 423 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 PCNAP12004 261 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 ENO3P13929 434 aaPredicted RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 CALRP27797 417 aaKnown RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 EIF2S3P41091 472 aaKnown RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 ALDH7A1P49419 539 aaKnown RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 CAMPP49913 170 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 GALCP54803 685 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 NAE1Q13564 534 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 KEAP1Q14145 624 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 HNF4GQ14541 408 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 CRYMQ14894 314 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 PCLAFQ15004 111 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 SHBQ15464 509 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 EIF2S3LQ2VIR3 472 aaKnown RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 USP41Q3LFD5 358 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 CFAP58Q5T655 872 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 PMS2CLQ68D20 193 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 RPUSD3Q6P087 351 aaKnown RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 TMEM154Q6P9G4 183 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 RBM23Q86U06 439 aaKnown RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 SFTPA2Q8IWL1 248 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 FBXL14Q8N1E6 418 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 TMEM199Q8N511 208 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 IQCF1Q8N6M8 205 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 SLC22A18Q96BI1 424 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 MED30Q96HR3 178 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 URB1-AS1Q96HZ7 61 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 FAM110AQ9BQ89 295 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 NTPCRQ9BSD7 190 aaKnown RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 SPRY4Q9C004 299 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 PLK3Q9H4B4 646 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 SMARCAD1Q9H4L7 1026 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 SLC28A3Q9HAS3 691 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 SIRT3Q9NTG7 399 aaPredicted RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 PAG1Q9NWQ8 432 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 CHORDC1Q9UHD1 332 aaPredicted RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 PCDHA7Q9UN72 937 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 PTRH2Q9Y3E5 179 aaKnown RBP3.79□□□□□ -1.8
CLK1-214ENST00000496205 SESN1Q9Y6P5 492 aa3.79□□□□□ -1.8
CLK1-214ENST00000496205 UTYO14607 1347 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 TMEM202A6NGA9 273 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 TTC36A6NLP5 189 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 BECN2A8MW95 431 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 H3BQ06 376 aaPredicted RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 CHL1O00533 1208 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 VCYO14598 125 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 KIF1CO43896 1103 aaKnown RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 TSPAN9O75954 239 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 CAMTA2O94983 1202 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 PLGP00747 810 aaPredicted RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 RPN1P04843 607 aaKnown RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 ZNF182P17025 639 aaPredicted RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 GNLYP22749 145 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 ACADLP28330 430 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 NNMTP40261 264 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 SLC15A1P46059 708 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 SUOXP51687 545 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 PPP5CP53041 499 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 PRAMEP78395 509 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 LTBQ06643 244 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 SOWAHCQ53LP3 525 aaPredicted RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 Q5PR19 223 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 TMCO3Q6UWJ1 677 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 PQLC2Q6ZP29 291 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 LINGO2Q7L985 606 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 KBTBD6Q86V97 674 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 FOXP4Q8IVH2 680 aaPredicted RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 WDR63Q8IWG1 891 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 TAGAPQ8N103 731 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 BEST2Q8NFU1 509 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 GABPB2Q8TAK5 448 aaPredicted RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 BICD2Q8TD16 824 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 OIT3Q8WWZ8 545 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 POMGNT1Q8WZA1 660 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 RRNAD1Q96FB5 475 aaKnown RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 PGAM5Q96HS1 289 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 ZNF333Q96JL9 665 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 EGLN2Q96KS0 407 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 GAD1Q99259 594 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 TMEM47Q9BQJ4 181 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 TXLNGYQ9BZA5 131 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 LTB4R2Q9NPC1 389 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 OGFRQ9NZT2 677 aa3.78□□□□□ -1.8
CLK1-214ENST00000496205 NFKBIL1Q9UBC1 381 aaPredicted RBP3.78□□□□□ -1.8
CLK1-214ENST00000496205 TMEM5Q9Y2B1 443 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms