RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 SPATA22Q8NHS9 363 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 KRT35Q92764 455 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 GLMNQ92990 594 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 EID2BQ96D98 161 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 ZNF830Q96NB3 372 aaPredicted RBP10.58□□□□□ -0.72
NELFE-213ENST00000494956 OLFM3Q96PB7 478 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 HERPUD2Q9BSE4 406 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 RIOK2Q9BVS4 552 aaKnown RBP10.58□□□□□ -0.72
NELFE-213ENST00000494956 FOXP3Q9BZS1 431 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 DPEP2Q9H4A9 486 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 C10orf88Q9H8K7 445 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 ARFGAP3Q9NP61 516 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 EVA1BQ9NVM1 165 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 UBP1Q9NZI7 540 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 LCMT1Q9UIC8 334 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 INTUQ9ULD6 942 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 PRKAB1Q9Y478 270 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 RNF215Q9Y6U7 377 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 DUSP10Q9Y6W6 482 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 SCN8AQ9UQD0 1980 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 CHD6Q8TD26 2715 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 ZFHX4Q86UP3 3567 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 A0A087WV48 116 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 A0A0U1RQJ8 604 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 C1orf232A0A0U1RR37 186 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 FADS2P1A8MWK0 482 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 ZNF487B1APH4 448 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 PSMD11O00231 422 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 NTN3O00634 580 aaPredicted RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 CST8O60676 142 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 LCA5LO95447 670 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 SLC4A1P02730 911 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 ATP1A1P05023 1023 aaKnown RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 RPLP0P05388 317 aaKnown RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 HOXC4P09017 264 aaPredicted RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 KELP23276 732 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 PTPN3P26045 913 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 SLC1A1P43005 524 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 RPIAP49247 311 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 CTBSQ01459 385 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 NOMO1Q15155 1222 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 TCEAL1Q15170 157 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 TBC1D25Q3MII6 688 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 ODF2Q5BJF6 829 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 ZNF648Q5T619 568 aaPredicted RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 LRRC38Q5VT99 294 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 OGFOD3Q6PK18 319 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 SLC30A9Q6PML9 568 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 LVRNQ6Q4G3 990 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 RAD9BQ6WBX8 426 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 SPOCD1Q6ZMY3 1216 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 RBM44Q6ZP01 1051 aaKnown RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 LYSMD3Q7Z3D4 306 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 TMPRSS9Q7Z410 1059 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 PDZD3Q86UT5 571 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 ZC3H18Q86VM9 953 aaKnown RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 ACRBPQ8NEB7 543 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 SCG3Q8WXD2 468 aaKnown RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 NAT6Q93015 286 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 FATE1Q969F0 183 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 TRIB3Q96RU7 358 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 DDX56Q9NY93 547 aaKnown RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 NCKIPSDQ9NZQ3 722 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 TAAR2Q9P1P5 351 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 SHOC2Q9UQ13 582 aa10.57□□□□□ -0.72
NELFE-213ENST00000494956 REXO2Q9Y3B8 237 aaKnown RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 OAS3Q9Y6K5 1087 aaKnown RBP10.57□□□□□ -0.72
NELFE-213ENST00000494956 CELSR3Q9NYQ7 3312 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 TRBV23OR9-2A0A075B6M9 112 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 hCG_1818297A0A087WSY0 165 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 AURKAO14965 403 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 FGF1P05230 155 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 HGFP14210 728 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 ZNF30P17039 623 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 CES1P23141 567 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 CD68P34810 354 aaPredicted RBP10.56□□□□□ -0.72
NELFE-213ENST00000494956 ADCY8P40145 1251 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 ABCG1P45844 678 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 HADHBP55084 474 aaKnown RBP10.56□□□□□ -0.72
NELFE-213ENST00000494956 DPTQ07507 201 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 SPIDRQ14159 915 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 HLTFQ14527 1009 aaKnown RBP eCLIP10.56□□□□□ -0.72
NELFE-213ENST00000494956 PDK1Q15118 436 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 PRKD1Q15139 912 aaPredicted RBP10.56□□□□□ -0.72
NELFE-213ENST00000494956 TAZQ16635 292 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 ALS2CLQ60I27 953 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 AADACL2Q6P093 401 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 NT5DC3Q86UY8 548 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 VSIG1Q86XK7 387 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 CCDC50Q8IVM0 306 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 NAGSQ8N159 534 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 NDUFAF2Q8N183 169 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 SNIP1Q8TAD8 396 aaKnown RBP10.56□□□□□ -0.72
NELFE-213ENST00000494956 GPBAR1Q8TDU6 330 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 FGF11Q92914 225 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 IMP4Q96G21 291 aaKnown RBP10.56□□□□□ -0.72
NELFE-213ENST00000494956 PRR11Q96HE9 360 aaPredicted RBP10.56□□□□□ -0.72
NELFE-213ENST00000494956 MLPHQ9BV36 600 aaPredicted RBP10.56□□□□□ -0.72
NELFE-213ENST00000494956 HEMGNQ9BXL5 484 aa10.56□□□□□ -0.72
NELFE-213ENST00000494956 LRRN3Q9H3W5 708 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms