RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	TSG101	Q99816	390 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	API5	Q9BZZ5	524 aa	Known RBP	4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	INTS2	Q9H0H0	1204 aa	Known RBP	4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	CRLF2	Q9HC73	371 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	UBN1	Q9NPG3	1134 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	PNRC2	Q9NPJ4	139 aa	Known RBP	4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	HPS4	Q9NQG7	708 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	NCKIPSD	Q9NZQ3	722 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	VPS18	Q9P253	973 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	MBD2	Q9UBB5	411 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	TEKT2	Q9UIF3	430 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	RAB21	Q9UL25	225 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	CLEC4A	Q9UMR7	237 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	TMEM5	Q9Y2B1	443 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	NPC1L1	Q9UHC9	1359 aa		4.75	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3D	A0A087WVF3	549 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3I	A0A087WXS9	549 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3E	A0A087X179	549 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3K	A0A087X1G2	549 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3B	A6NDS4	549 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TMEM247	A6NEH6	219 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	BECN2	A8MW95	431 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3L	B9A6J9	549 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	MCIDAS	D6RGH6	385 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672		F5H423	210 aa	Predicted RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	STMND1	H3BQB6	276 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	VWA5A	O00534	786 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	PCDH17	O14917	1159 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	HAT1	O14929	419 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	SOCS5	O75159	536 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	PENK	P01210	267 aa	Predicted RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	DNTT	P04053	509 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	ATP5B	P06576	529 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3H	P0C7X1	549 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	PNMA6A	P0CW24	399 aa	Predicted RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	HPGD	P15428	266 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	GPT	P24298	496 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	EVI2B	P34910	448 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TRIM23	P36406	574 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	ACADSB	P45954	432 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	MTIF2	P46199	727 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	HSPA7	P48741	367 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TUFM	P49411	452 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	PCYT1A	P49585	367 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	AP3M2	P53677	418 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	RARS	P54136	660 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	FOXL2	P58012	376 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	DSCR9	P59020	149 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	RPP38	P78345	283 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	CRYZ	Q08257	329 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	HSPA14	Q0VDF9	509 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	CBX3	Q13185	183 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	SGCG	Q13326	291 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	GPR18	Q14330	331 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	FRG1	Q14331	258 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	STK38	Q15208	465 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	FUT11	Q495W5	492 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	KRTCAP3	Q53RY4	240 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	SLC45A4	Q5BKX6	768 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	GPATCH4	Q5T3I0	446 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3G	Q6DHY5	549 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3C	Q6IPX1	549 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	RETSAT	Q6NUM9	610 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	RINT1	Q6NUQ1	792 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	MDGA2	Q7Z553	956 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	NKAIN4	Q8IVV8	208 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	SLC25A41	Q8N5S1	370 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	MAB21L3	Q8N8X9	362 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	XXYLT1	Q8NBI6	393 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	DYDC1	Q8WWB3	177 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	IP6K1	Q92551	441 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	CASP10	Q92851	521 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	VPS39	Q96JC1	886 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	RPGRIP1	Q96KN7	1286 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TTC25	Q96NG3	672 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	MPHOSPH8	Q99549	860 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	COQ7	Q99807	217 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	CDT1	Q9H211	546 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	MAGEH1	Q9H213	219 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	PARVB	Q9HBI1	364 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	SDHAF3	Q9NRP4	125 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	INTS10	Q9NVR2	710 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	MCM9	Q9NXL9	1143 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	MIS18A	Q9NYP9	233 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	EHD2	Q9NZN4	543 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TRPC5	Q9UL62	973 aa	Predicted RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	CFL2	Q9Y281	166 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	ZBTB1	Q9Y2K1	713 aa		4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	BZW2	Q9Y6E2	419 aa	Known RBP	4.74	□□□□□ -1.65
CCDC66-222	ENST00000494672	MROH5	Q6ZUA9	1318 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	KIAA1107	Q9UPP5	1409 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CTAGE9	A4FU28	777 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms