RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 OTULINQ96BN8 352 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 MSI2Q96DH6 328 aaKnown RBP4.25□□□□□ -1.73
CMSS1-207ENST00000494412 LINC00615Q96LM1 132 aaPredicted RBP4.25□□□□□ -1.73
CMSS1-207ENST00000494412 CCDC114Q96M63 670 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 ACOX2Q99424 681 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 TIMP4Q99727 224 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 NUP85Q9BW27 656 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 RTN4RQ9BZR6 473 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 KLK15Q9H2R5 256 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 PIGMQ9H3S5 423 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 COPS7BQ9H9Q2 264 aaPredicted RBP4.25□□□□□ -1.73
CMSS1-207ENST00000494412 CYSLTR2Q9NS75 346 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 RNF146Q9NTX7 359 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 CHCHD3Q9NX63 227 aaKnown RBP4.25□□□□□ -1.73
CMSS1-207ENST00000494412 MTMR10Q9NXD2 777 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 ANKRD10Q9NXR5 420 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 COPG2Q9UBF2 871 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 CRNNQ9UBG3 495 aaPredicted RBP4.25□□□□□ -1.73
CMSS1-207ENST00000494412 DNAJB9Q9UBS3 223 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 FBXW11Q9UKB1 542 aa4.25□□□□□ -1.73
CMSS1-207ENST00000494412 A0A0U1RQK1 487 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 EDDM13A0A1B0GTR0 161 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 ZNF320A2RRD8 509 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 MAGEB17A8MXT2 336 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 PRPF4O43172 522 aaKnown RBP eCLIP4.24□□□□□ -1.73
CMSS1-207ENST00000494412 GOSR1O95249 250 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 MMP3P08254 477 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 GJA1P17302 382 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 DNASE1P24855 282 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 HOXC13P31276 330 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 PRKCIP41743 596 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 ARSEP51690 589 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 CACNA2D1P54289 1103 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 STIM1Q13586 685 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 NFE2L1Q14494 772 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 PNLIPRP3Q17RR3 467 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 PROSER3Q2NL68 480 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 MIDNQ504T8 468 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 ARMC4Q5T2S8 1044 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 MPP7Q5T2T1 576 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 DHRS7BQ6IAN0 325 aaPredicted RBP4.24□□□□□ -1.73
CMSS1-207ENST00000494412 ZNF813Q6ZN06 617 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 FAM57BQ71RH2 274 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 PIWIL3Q7Z3Z3 882 aaKnown RBP4.24□□□□□ -1.73
CMSS1-207ENST00000494412 HAUS6Q7Z4H7 955 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 TSPAN33Q86UF1 283 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 FAM217AQ8IXS0 508 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 IQUBQ8NA54 791 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 SLC16A11Q8NCK7 471 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 RBM15BQ8NDT2 890 aaKnown RBP4.24□□□□□ -1.73
CMSS1-207ENST00000494412 CFAP61Q8NHU2 1237 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 CEP76Q8TAP6 659 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 BCAS4Q8TDM0 211 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 TRPC4APQ8TEL6 797 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 ZNF333Q96JL9 665 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 EGLN2Q96KS0 407 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 ZNF830Q96NB3 372 aaPredicted RBP4.24□□□□□ -1.73
CMSS1-207ENST00000494412 AGAP2Q99490 1192 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 SLC25A23Q9BV35 468 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 DUSP26Q9BV47 211 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 NPFFR1Q9GZQ6 430 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 DNAI2Q9GZS0 605 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 SPATC1LQ9H0A9 340 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 SLCO5A1Q9H2Y9 848 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 MMP27Q9H306 513 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 SPAG4Q9NPE6 437 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 MBNL1Q9NR56 388 aaKnown RBP4.24□□□□□ -1.73
CMSS1-207ENST00000494412 OLAHQ9NV23 265 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 HACL1Q9UJ83 578 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 SLC4A4Q9Y6R1 1079 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 ARHGEF40Q8TER5 1519 aa4.24□□□□□ -1.73
CMSS1-207ENST00000494412 ZNF335Q9H4Z2 1342 aaPredicted RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 KIR2DS5A0A0G2JLQ3 304 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 F8W810 466 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 KIR2DS3K7RE56 304 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 ICAM1P05362 532 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 PRLRP16471 622 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 WT1P19544 449 aaPredicted RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 HOXC8P31273 242 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 DCTDP32321 178 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 KRT2P35908 639 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 HNF4AP41235 474 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 AMPHP49418 695 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 CDH13P55290 713 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 PPP2R2BQ00005 443 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 UBXN1Q04323 297 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 GAD2Q05329 585 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 SCN1BQ07699 218 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 FAM27E3Q08E93 113 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 SREBF2Q12772 1141 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 PTK6Q13882 451 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 SLC9C1Q4G0N8 1177 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 CBWD6Q4V339 395 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 CBWD3Q5JTY5 395 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 KRT39Q6A163 491 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 SIGIRRQ6IA17 410 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 TMEM71Q6P5X7 295 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 PPP1R21Q6ZMI0 780 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 RAPH1Q70E73 1250 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 TRILQ7L0X0 811 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms