RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ST6GAL2Q96JF0 529 aa4□□□□□ -1.77
SMC4-223ENST00000493695 CMKLR1Q99788 373 aa4□□□□□ -1.77
SMC4-223ENST00000493695 HAUS8Q9BT25 410 aa4□□□□□ -1.77
SMC4-223ENST00000493695 PHF7Q9BWX1 381 aaPredicted RBP4□□□□□ -1.77
SMC4-223ENST00000493695 SLC13A4Q9UKG4 626 aa4□□□□□ -1.77
SMC4-223ENST00000493695 C17orf113A0A1B0GUU1 675 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 SMIM1B2RUZ4 78 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 NPHP1O15259 732 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 POLBP06746 335 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 AMPHP49418 695 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 BLKP51451 505 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 IRX1P78414 480 aaPredicted RBP3.99□□□□□ -1.77
SMC4-223ENST00000493695 SLC12A1Q13621 1099 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 NAA25Q14CX7 972 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 EIF2S3LQ2VIR3 472 aaKnown RBP3.99□□□□□ -1.77
SMC4-223ENST00000493695 ATG16L1Q676U5 607 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 STPG4Q8N801 248 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 LSM14AQ8ND56 463 aaKnown RBP3.99□□□□□ -1.77
SMC4-223ENST00000493695 SH3KBP1Q96B97 665 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 ATOH8Q96SQ7 321 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 MTERF1Q99551 399 aaKnown RBP3.99□□□□□ -1.77
SMC4-223ENST00000493695 SYT17Q9BSW7 474 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 PDZD7Q9H5P4 517 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 HCFC1R1Q9NWW0 138 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 ALKBH4Q9NXW9 302 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.99□□□□□ -1.77
SMC4-223ENST00000493695 CARD8Q9Y2G2 431 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 GDAQ9Y2T3 454 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 OR2W1Q9Y3N9 320 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 PRSS21Q9Y6M0 314 aa3.99□□□□□ -1.77
SMC4-223ENST00000493695 PABPN1LA6NDY0 278 aaKnown RBP3.98□□□□□ -1.77
SMC4-223ENST00000493695 CBY3A6NI87 242 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 PEX12O00623 359 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 PER2O15055 1255 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 ETFAP13804 333 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 ITGAXP20702 1163 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 SP100P23497 879 aaPredicted RBP3.98□□□□□ -1.77
SMC4-223ENST00000493695 PAX3P23760 479 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 DDIT3P35638 169 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 CSRP3P50461 194 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 CLDN2P57739 230 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 GTF2H2Q13888 395 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 GTF2H2CQ6P1K8 395 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 MMS22LQ6ZRQ5 1243 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 GPAT4Q86UL3 456 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 NOXA1Q86UR1 476 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 C1orf87Q8N0U7 546 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 ZCCHC9Q8N567 271 aaKnown RBP3.98□□□□□ -1.77
SMC4-223ENST00000493695 KLHDC9Q8NEP7 349 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 RAB40AQ8WXH6 277 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 LRR1Q96L50 414 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 C17orf77Q96MU5 243 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 CLSTN3Q9BQT9 956 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMC4-223ENST00000493695 LMAN2LQ9H0V9 348 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 TAOK3Q9H2K8 898 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 MROH8Q9H579 483 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 EPHX3Q9H6B9 360 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 TMEM30AQ9NV96 361 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 CRYL1Q9Y2S2 319 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 TMEM98Q9Y2Y6 226 aa3.98□□□□□ -1.77
SMC4-223ENST00000493695 KLK10O43240 276 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 CIDEAO60543 219 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 AGR2O95994 175 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 PAX1P15863 534 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 RRM1P23921 792 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 CNTFP26441 200 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 BDKRB2P30411 391 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 CORO1AP31146 461 aaKnown RBP3.97□□□□□ -1.77
SMC4-223ENST00000493695 PSMC2P35998 433 aaKnown RBP3.97□□□□□ -1.77
SMC4-223ENST00000493695 TUBP50607 506 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 EFNA5P52803 228 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 EEF1A1P68104 462 aaKnown RBP3.97□□□□□ -1.77
SMC4-223ENST00000493695 TRPC3Q13507 836 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 PRICKLE4Q2TBC4 344 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 CCNYL2Q5T2Q4 361 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 EEF1A1P5Q5VTE0 462 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 NAA35Q5VZE5 725 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 KCTD18Q6PI47 426 aaPredicted RBP3.97□□□□□ -1.77
SMC4-223ENST00000493695 FAM160B2Q86V87 743 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 FOXRED2Q8IWF2 684 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 HTRA1Q92743 480 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 FBXL8Q96CD0 374 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 ART5Q96L15 291 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 PPM1MQ96MI6 270 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 BBS4Q96RK4 519 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 CD180Q99467 661 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 GPR63Q9BZJ6 419 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 STN1Q9H668 368 aaKnown RBP3.97□□□□□ -1.77
SMC4-223ENST00000493695 GPR108Q9NPR9 543 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 SLC52A3Q9NQ40 469 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 LOXL2Q9Y4K0 774 aa3.97□□□□□ -1.77
SMC4-223ENST00000493695 GOLGA6L10A0A0M3HER8 536 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 CCDC196A0A1B0GTZ2 297 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 KLK8O60259 260 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 CYC1P08574 325 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 CLK1P49759 484 aaKnown RBP3.96□□□□□ -1.78
SMC4-223ENST00000493695 DSCR10P59022 87 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 LMO4P61968 165 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 SLC45A4Q5BKX6 768 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms