RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ACSS1Q9NUB1 689 aaPredicted RBP4□□□□□ -1.77
CLK1-213ENST00000492793 SETD4Q9NVD3 440 aa4□□□□□ -1.77
CLK1-213ENST00000492793 OGFRQ9NZT2 677 aa4□□□□□ -1.77
CLK1-213ENST00000492793 OR14J1Q9UGF5 321 aa4□□□□□ -1.77
CLK1-213ENST00000492793 SLC45A1Q9Y2W3 748 aa4□□□□□ -1.77
CLK1-213ENST00000492793 FAM90A8PA6NJQ4 464 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 A8MZ25 164 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 SOCS6O14544 535 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 CTDSP2O14595 271 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 HCRTR2O43614 444 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 SOX30O94993 753 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 OR2C1O95371 312 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 FTCDO95954 541 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 TOMM40O96008 361 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 HSP90AA1P07900 732 aaKnown RBP3.99□□□□□ -1.77
CLK1-213ENST00000492793 FAM90A13PP0C7W8 464 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 FAM90A24PP0C7X0 464 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 DDX5P17844 614 aaKnown RBP3.99□□□□□ -1.77
CLK1-213ENST00000492793 GABRB1P18505 474 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 MAOAP21397 527 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 BDKRB2P30411 391 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 ARRB2P32121 409 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 MFAP4P55083 255 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 CSNK2A1P68400 391 aaPredicted RBP3.99□□□□□ -1.77
CLK1-213ENST00000492793 ZBED6P86452 979 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 FOXM1Q08050 763 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 EFNB3Q15768 340 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 PNLIPRP3Q17RR3 467 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 ASTE1Q2TB18 679 aaPredicted RBP3.99□□□□□ -1.77
CLK1-213ENST00000492793 XKR9Q5GH70 373 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 EFHC1Q5JVL4 640 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 AWAT2Q6E213 333 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 ENOSF1Q7L5Y1 443 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 CACNA2D4Q7Z3S7 1137 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 SDCCAG8Q86SQ7 713 aaPredicted RBP3.99□□□□□ -1.77
CLK1-213ENST00000492793 CSNK2A3Q8NEV1 391 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 TMED6Q8WW62 240 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 RSRC1Q96IZ7 334 aaKnown RBP3.99□□□□□ -1.77
CLK1-213ENST00000492793 OR1F2PQ96R84 312 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 CSF3RQ99062 836 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 SEZ6LQ9BYH1 1024 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 PIGMQ9H3S5 423 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 C17orf75Q9HAS0 396 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 NOX4Q9NPH5 578 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 COPG2Q9UBF2 871 aa3.99□□□□□ -1.77
CLK1-213ENST00000492793 FAM90A10PA6NDY2 464 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 AGAP14A8MT82 685 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 OGG1O15527 345 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 NDUFS7O75251 213 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 OAZ2O95190 189 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 KCNK5O95279 499 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 HIST1H2ABP04908 130 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 ACAA1P09110 424 aaPredicted RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 HIST1H2ADP20671 130 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 RRM1P23921 792 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 ITGB8P26012 769 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 SSTR2P30874 369 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 EIF2DP41214 584 aaKnown RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 CDKN2AP42771 156 aaKnown RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 SLC15A1P46059 708 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 PEX5P50542 639 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 TAS2R40P59535 323 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 NUCB1Q02818 461 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 CRYZQ08257 329 aaKnown RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 GRSF1Q12849 480 aaKnown RBP eCLIP3.98□□□□□ -1.77
CLK1-213ENST00000492793 TRAF2Q12933 501 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 GRIK2Q13002 908 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 STK4Q13043 487 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 AIMP2Q13155 320 aaKnown RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 ACVR2BQ13705 512 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 DHX34Q14147 1143 aaKnown RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 IRF3Q14653 427 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 AMZ1Q400G9 498 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 PPP6R3Q5H9R7 873 aaPredicted RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 RAB41Q5JT25 222 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 PAPPA-AS1Q5QFB9 102 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 PLEKHS1Q5SXH7 462 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 RGMBQ6NW40 437 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 TMCO3Q6UWJ1 677 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 KRBA2Q6ZNG9 492 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 CLEC17AQ6ZS10 378 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 HIST3H2AQ7L7L0 130 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 ADHFE1Q8IWW8 467 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 RNF168Q8IYW5 571 aaPredicted RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 PELI3Q8N2H9 469 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 HJURPQ8NCD3 748 aaPredicted RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 SCARB1Q8WTV0 552 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 ZBTB9Q96C00 473 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 FEM1CQ96JP0 617 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 SMC6Q96SB8 1091 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 SEPT5Q99719 369 aaPredicted RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 CMKLR1Q99788 373 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 SH3GL2Q99962 352 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 CENPOQ9BU64 300 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 OCIAD1Q9NX40 245 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 CHORDC1Q9UHD1 332 aaPredicted RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 AGO1Q9UL18 857 aaKnown RBP3.98□□□□□ -1.77
CLK1-213ENST00000492793 CLIC4Q9Y696 253 aa3.98□□□□□ -1.77
CLK1-213ENST00000492793 M0QZ24 198 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 HS3ST1O14792 307 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms