RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 GOLGA6CA6NDK9 693 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 GOLGA6BA6NDN3 693 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 CACNB4O00305 520 aaPredicted RBP25.71■■□□□ 1.71
TTC3-223ENST00000492275 IFNB1P01574 187 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 GOLGA6DP0CG33 693 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 HTR1BP28222 390 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 GPR1P46091 355 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 KCNJ1P48048 391 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 GNG11P61952 73 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 HNRNPKP61978 463 aaKnown RBP eCLIP25.71■■□□□ 1.71
TTC3-223ENST00000492275 ALG11Q2TAA5 492 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 DENND5AQ6IQ26 1287 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 PHACTR4Q8IZ21 702 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 RBFAQ8N0V3 343 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 TTC30BQ8N4P2 665 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 TSACCQ96A04 125 aaPredicted RBP25.71■■□□□ 1.71
TTC3-223ENST00000492275 FAM83DQ9H4H8 585 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 GOLGA6AQ9NYA3 693 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 SMARCAL1Q9NZC9 954 aa25.71■■□□□ 1.71
TTC3-223ENST00000492275 ZNF185O15231 689 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 USP12O75317 370 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 SLC4A1P02730 911 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 GIMD1P0DJR0 217 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 MYCLP1P12525 358 aaPredicted RBP25.7■■□□□ 1.7
TTC3-223ENST00000492275 CDK3Q00526 305 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 PPARDQ03181 441 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 MSLNQ13421 630 aaPredicted RBP25.7■■□□□ 1.7
TTC3-223ENST00000492275 HENMT1Q5T8I9 393 aaKnown RBP25.7■■□□□ 1.7
TTC3-223ENST00000492275 ADAMTSL4Q6UY14 1074 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 EID2Q8N6I1 236 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 GPR26Q8NDV2 337 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 TBL1YQ9BQ87 522 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 TRABDQ9H4I3 376 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 PHPT1Q9NRX4 125 aaPredicted RBP25.7■■□□□ 1.7
TTC3-223ENST00000492275 HOMER3Q9NSC5 361 aa25.7■■□□□ 1.7
TTC3-223ENST00000492275 COL5A1P20908 1838 aaPredicted RBP25.7■■□□□ 1.7
TTC3-223ENST00000492275 SPAARA0A1B0GVQ0 90 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 H3BM21 787 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 ZSCAN5DPP0CG00 497 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 KCNA4P22459 653 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 SRP54P61011 504 aaKnown RBP25.69■■□□□ 1.7
TTC3-223ENST00000492275 TRIP6Q15654 476 aaKnown RBP25.69■■□□□ 1.7
TTC3-223ENST00000492275 C17orf53Q8N3J3 647 aaPredicted RBP25.69■■□□□ 1.7
TTC3-223ENST00000492275 PDCD7Q8N8D1 485 aaKnown RBP25.69■■□□□ 1.7
TTC3-223ENST00000492275 OR56A4Q8NGH8 313 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 ATL2Q8NHH9 583 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 ACTRT1Q8TDG2 376 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 BLOC1S5Q8TDH9 187 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 OR1E3Q8WZA6 343 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 AP1M1Q9BXS5 423 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 ETNK1Q9HBU6 452 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 ARNT2Q9HBZ2 717 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 FGF22Q9HCT0 170 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 MRPL40Q9NQ50 206 aaKnown RBP25.69■■□□□ 1.7
TTC3-223ENST00000492275 HACD3Q9P035 362 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 KLQ9UEF7 1012 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 CNOT6Q9ULM6 557 aaKnown RBP25.69■■□□□ 1.7
TTC3-223ENST00000492275 MYLKQ15746 1914 aa25.69■■□□□ 1.7
TTC3-223ENST00000492275 CES2O00748 559 aa25.68■■□□□ 1.7
TTC3-223ENST00000492275 BPIP17213 487 aa25.68■■□□□ 1.7
TTC3-223ENST00000492275 RPL22P35268 128 aaKnown RBP25.68■■□□□ 1.7
TTC3-223ENST00000492275 HMGCLP35914 325 aa25.68■■□□□ 1.7
TTC3-223ENST00000492275 HK3P52790 923 aa25.68■■□□□ 1.7
TTC3-223ENST00000492275 INAVAQ3KP66 663 aa25.68■■□□□ 1.7
TTC3-223ENST00000492275 HID1Q8IV36 788 aa25.68■■□□□ 1.7
TTC3-223ENST00000492275 ZNF548Q8NEK5 533 aaPredicted RBP25.68■■□□□ 1.7
TTC3-223ENST00000492275 BTN2A2Q8WVV5 523 aa25.68■■□□□ 1.7
TTC3-223ENST00000492275 BPIFA1Q9NP55 256 aa25.68■■□□□ 1.7
TTC3-223ENST00000492275 APOBEC3BQ9UH17 382 aaKnown RBP25.68■■□□□ 1.7
TTC3-223ENST00000492275 FADS2P1A8MWK0 482 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 PDE2AO00408 941 aaPredicted RBP25.67■■□□□ 1.7
TTC3-223ENST00000492275 TRIM38O00635 465 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 TNFRSF10CO14798 259 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 PSMD3O43242 534 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 RASGRP1O95267 797 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 AP2A1O95782 977 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 FUCA1P04066 466 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 PYGLP06737 847 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 KELP23276 732 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 C1orf61Q13536 156 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 ALS2CLQ60I27 953 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 RD3Q7Z3Z2 195 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 CCDC89Q8N998 374 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 LMX1AQ8TE12 382 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 PDXPQ96GD0 296 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 TBATAQ96M53 351 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 CDC6Q99741 560 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 LRRC61Q9BV99 259 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 FRMD8Q9BZ67 464 aaPredicted RBP25.67■■□□□ 1.7
TTC3-223ENST00000492275 SLC13A1Q9BZW2 595 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 LRRC40Q9H9A6 602 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 IL17CQ9P0M4 197 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 NFKBIL1Q9UBC1 381 aaPredicted RBP25.67■■□□□ 1.7
TTC3-223ENST00000492275 DGKBQ9Y6T7 804 aa25.67■■□□□ 1.7
TTC3-223ENST00000492275 PGRMC1O00264 195 aaKnown RBP25.66■■□□□ 1.7
TTC3-223ENST00000492275 SCAMP1O15126 338 aa25.66■■□□□ 1.7
TTC3-223ENST00000492275 FANCGO15287 622 aa25.66■■□□□ 1.7
TTC3-223ENST00000492275 CEACAM5P06731 702 aa25.66■■□□□ 1.7
TTC3-223ENST00000492275 ACTN2P35609 894 aa25.66■■□□□ 1.7
TTC3-223ENST00000492275 FDFT1P37268 417 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms