RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 NAF1Q96HR8 494 aaKnown RBP17.94■□□□□ 0.46
HMGN1-219ENST00000491183 BBC3Q96PG8 261 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-219ENST00000491183 WDR24Q96S15 920 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 HAUS2Q9NVX0 235 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 TRNAU1APQ9NX07 287 aaKnown RBP17.94■□□□□ 0.46
HMGN1-219ENST00000491183 APPL1Q9UKG1 709 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 PCDHGA8Q9Y5G5 932 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 APOL1O14791 398 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 KRT1P04264 644 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 IVLP07476 585 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 COMTP21964 271 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 AK4P27144 223 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 CD86P42081 329 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 SLC1A1P43005 524 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 PCBP4P57723 403 aaKnown RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 RPL26P61254 145 aaKnown RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 TLE3Q04726 772 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 QPCTQ16769 361 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 SARM1Q6SZW1 724 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 B4GALNT4Q76KP1 1039 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 ZNF765Q7L2R6 523 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 C17orf82Q86X59 251 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 RHOT1Q8IXI2 618 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 Q8N9G6 341 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 TC2NQ8N9U0 490 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 ZNF248Q8NDW4 579 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 WDR36Q8NI36 951 aaKnown RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 SCARF2Q96GP6 870 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 ZNF830Q96NB3 372 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 OLFM3Q96PB7 478 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 GFM1Q96RP9 751 aaKnown RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 LYSMD1Q96S90 227 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 RIOK2Q9BVS4 552 aaKnown RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 MAK16Q9BXY0 300 aaKnown RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 CEP41Q9BYV8 373 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 LRIT1Q9P2V4 623 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 RPL26L1Q9UNX3 145 aaKnown RBP17.93■□□□□ 0.46
HMGN1-219ENST00000491183 TMEM98Q9Y2Y6 226 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 PLEKHM1Q9Y4G2 1056 aa17.93■□□□□ 0.46
HMGN1-219ENST00000491183 CCDC187A0A096LP49 1063 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 ANKRD66B4E2M5 251 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 D6RAR5 112 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 TNNT1P13805 278 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 PNLIPP16233 465 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 CA4P22748 312 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 ADCY8P40145 1251 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 MAZP56270 477 aaKnown RBP17.92■□□□□ 0.46
HMGN1-219ENST00000491183 B4GALNT1Q00973 533 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 CTBSQ01459 385 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 AP1B1Q10567 949 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 FOXR1Q6PIV2 292 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 DOK6Q6PKX4 331 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 MFSD7Q6UXD7 560 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 TRIM74Q86UV6 250 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 CCNJLQ8IV13 435 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 NRSN1Q8IZ57 195 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 COX14Q96I36 57 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 GSDMCQ9BYG8 508 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 FOXP3Q9BZS1 431 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 THSD1Q9NS62 852 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 TAAR2Q9P1P5 351 aa17.92■□□□□ 0.46
HMGN1-219ENST00000491183 ATXN7L1Q9ULK2 861 aaPredicted RBP17.92■□□□□ 0.46
HMGN1-219ENST00000491183 PTPRQQ9UMZ3 2332 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 CDRT15L2A8MXV6 281 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 B4GAT1O43505 415 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 NUDT21O43809 227 aaKnown RBP17.91■□□□□ 0.46
HMGN1-219ENST00000491183 RBMS1P29558 406 aaKnown RBP17.91■□□□□ 0.46
HMGN1-219ENST00000491183 MAGEA1P43355 309 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 INHBCP55103 352 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 ILF3Q12906 894 aaKnown RBP eCLIP17.91■□□□□ 0.46
HMGN1-219ENST00000491183 PDK1Q15118 436 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 TAZQ16635 292 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 SPRED1Q7Z699 444 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 RFX6Q8HWS3 928 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 RAVER1Q8IY67 606 aaKnown RBP17.91■□□□□ 0.46
HMGN1-219ENST00000491183 ZDHHC1Q8WTX9 485 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 PATE1Q8WXA2 126 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 LIN37Q96GY3 246 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-219ENST00000491183 MLPHQ9BV36 600 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-219ENST00000491183 TRIM5Q9C035 493 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 DDX56Q9NY93 547 aaKnown RBP17.91■□□□□ 0.46
HMGN1-219ENST00000491183 DNPEPQ9ULA0 475 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 CNOT6Q9ULM6 557 aaKnown RBP17.91■□□□□ 0.46
HMGN1-219ENST00000491183 TFR2Q9UP52 801 aa17.91■□□□□ 0.46
HMGN1-219ENST00000491183 INPP4BO15327 924 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 TNFSF15O95150 251 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 ECEL1O95672 775 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 ZFXP17010 805 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-219ENST00000491183 CDKN2BP42772 138 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 SPINT3P49223 89 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 HADHBP55084 474 aaKnown RBP17.9■□□□□ 0.46
HMGN1-219ENST00000491183 DYNLT1P63172 113 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 ZFP36L1Q07352 338 aaKnown RBP17.9■□□□□ 0.46
HMGN1-219ENST00000491183 PYCR3Q53H96 274 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 SLC30A9Q6PML9 568 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 TMPRSS9Q7Z410 1059 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 NAGSQ8N159 534 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 ARL14Q8N4G2 192 aa17.9■□□□□ 0.46
HMGN1-219ENST00000491183 EXD1Q8NHP7 514 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms