RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 TMEM206Q9H813 350 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 VPS37BQ9H9H4 285 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PLGRKTQ9HBL7 147 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 AGO4Q9HCK5 861 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PALMDQ9NP74 551 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 UBE2TQ9NPD8 197 aaPredicted RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ACP6Q9NPH0 428 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 TRPV5Q9NQA5 729 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 INIPQ9NRY2 104 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 SEPT11Q9NVA2 429 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 INTS7Q9NVH2 962 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 RHBDL2Q9NX52 303 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 UBAP1Q9NZ09 502 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ZIM2Q9NZV7 527 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ARMCX1Q9P291 453 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF69Q9UC07 566 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 RIMS3Q9UJD0 308 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ANAPC7Q9UJX3 599 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CDC42EP3Q9UKI2 254 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PAIP2BQ9ULR5 123 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 BARX2Q9UMQ3 279 aaPredicted RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PRPF19Q9UMS4 504 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 SYNPO2Q9UMS6 1093 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MAPRE3Q9UPY8 281 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CNTN6Q9UQ52 1028 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 LZTS1Q9Y250 596 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 DTNAQ9Y4J8 743 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MAD1L1Q9Y6D9 718 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CEPT1Q9Y6K0 416 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MYLKQ15746 1914 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 BRCA2P51587 3418 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PTPRDP23468 1912 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 hCG_1818297A0A087WSY0 165 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PRSS51A0A1B0GVH4 220 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 TCRBV9S1A1TA0A576 114 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 C3orf70A6NLC5 250 aaPredicted RBP3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PRR5-ARHGAP8B1AHC4 643 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 POC1B-GALNT4F8VUJ3 575 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 I3L4J1 428 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 SLC22A2O15244 555 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ITM2AO43736 263 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 LPXNO60711 386 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 GAS7O60861 476 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 KATNA1O75449 491 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 BAIAP3O94812 1187 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 KLHL2O95198 593 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 SNAI1O95863 264 aaPredicted RBP3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PGK1P00558 417 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 MT-ND3P03897 115 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ENO1P06733 434 aaKnown RBP3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 BPGMP07738 259 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 CCDC130P13994 396 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 KCNA2P16389 499 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 CPEP16870 476 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF12P17014 697 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF24P17028 368 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 CR2P20023 1033 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ACO1P21399 889 aaKnown RBP3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 BGNP21810 368 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PROZP22891 400 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PRKCHP24723 683 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PCSK6P29122 969 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 CDKN2BP42772 138 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 CYP2J2P51589 502 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ARSEP51690 589 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 STAT5BP51692 787 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 CLCN3P51790 818 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 COPAP53621 1224 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 RRADP55042 308 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 MTTPP55157 894 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 TUBA4AP68366 448 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 NOMO3P69849 1222 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 TXNL4AP83876 142 aaKnown RBP3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ARHGAP8P85298 464 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 GTF2BQ00403 316 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PRKCEQ02156 737 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ADCY1Q08828 1119 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 GPS1Q13098 491 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PIN1Q13526 163 aaPredicted RBP3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 HERC3Q15034 1050 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 MLC1Q15049 377 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 CLPPQ16740 277 aaPredicted RBP3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 TCTN1Q2MV58 587 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 GFOD2Q3B7J2 385 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 KBTBD12Q3ZCT8 623 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PDCD4Q53EL6 469 aaKnown RBP3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 SLC44A4Q53GD3 710 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ZBTB41Q5SVQ8 909 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ATG16L1Q676U5 607 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 LMBRD2Q68DH5 695 aaPredicted RBP3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 GRAMD4Q6IC98 578 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ZFP1Q6P2D0 407 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 DCLRE1AQ6PJP8 1040 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 PACS1Q6VY07 963 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 BBS12Q6ZW61 710 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 ANO5Q75V66 913 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 MIER3Q7Z3K6 550 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 POLNQ7Z5Q5 900 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 NECAB2Q7Z6G3 386 aa3.49□□□□□ -1.85
CRNKL1-203ENST00000490258 RNF180Q86T96 592 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms