RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 UPB1Q9UBR1 384 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 SQORQ9Y6N5 450 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 FAM208AQ9UK61 1670 aaKnown RBP2.99□□□□□ -1.93
UBXN4-208ENST00000490163 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.99□□□□□ -1.93
UBXN4-208ENST00000490163 CFAP65Q6ZU64 1925 aaKnown RBP2.99□□□□□ -1.93
UBXN4-208ENST00000490163 CLRN2A0PK11 232 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 OR14I1A6ND48 311 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 TMEM8BA6NDV4 472 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 RAD17O75943 681 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 SLITRK3O94933 977 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 TMEM225BP0DP42 221 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 MTHFRP42898 656 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 TRPC1P48995 793 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 IRAK1P51617 712 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 TPD52P55327 224 aaPredicted RBP2.99□□□□□ -1.93
UBXN4-208ENST00000490163 HMGN5P82970 282 aaKnown RBP2.99□□□□□ -1.93
UBXN4-208ENST00000490163 SLC18A2Q05940 514 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 FZD5Q13467 585 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 RNF151Q2KHN1 245 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 RIPPLY2Q5TAB7 128 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 FAM91A1Q658Y4 838 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 LINGO2Q7L985 606 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 PRSS42Q7Z5A4 293 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 FAM160B2Q86V87 743 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 SPC24Q8NBT2 197 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 ADPRHL1Q8NDY3 354 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 RAD54LQ92698 747 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 EPSTI1Q96J88 318 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 CNDP1Q96KN2 507 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 AK8Q96MA6 479 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 INPP5KQ9BT40 448 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 ACPTQ9BZG2 426 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 MCOLN1Q9GZU1 580 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 RPH3AQ9Y2J0 694 aaPredicted RBP2.99□□□□□ -1.93
UBXN4-208ENST00000490163 SIRT4Q9Y6E7 314 aaPredicted RBP2.99□□□□□ -1.93
UBXN4-208ENST00000490163 VIRMAQ69YN4 1812 aaKnown RBP2.99□□□□□ -1.93
UBXN4-208ENST00000490163 TAF1P21675 1872 aa2.99□□□□□ -1.93
UBXN4-208ENST00000490163 NRAPQ86VF7 1730 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 KTN1Q86UP2 1357 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 PLEKHG1Q9ULL1 1385 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 TRBV5-7A0A0A0MS05 114 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ARHGAP10A1A4S6 786 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ELOVL7A1L3X0 281 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ATG13O75143 517 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 MAOAP21397 527 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 MCM3P25205 808 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 RPS19P39019 145 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 MC3RP41968 323 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 PAFAH1B1P43034 410 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 PMP22Q01453 160 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 GABPB1Q06547 395 aaPredicted RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CHIT1Q13231 466 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 NFE2L1Q14494 772 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 NR1D2Q14995 579 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CYP1B1Q16678 543 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CD300LDQ6UXZ3 194 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 DNAJC10Q8IXB1 793 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SLC15A3Q8IY34 581 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SUPT20HQ8NEM7 779 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 STEAP2Q8NFT2 490 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CFAP61Q8NHU2 1237 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 NEU4Q8WWR8 484 aaPredicted RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 DCLRE1CQ96SD1 692 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SRSF8Q9BRL6 282 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 H2AFJQ9BTM1 129 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 FSD1LQ9BXM9 530 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 KCNN2Q9H2S1 579 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 TRPV5Q9NQA5 729 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SERTAD4Q9NUC0 356 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 TAB2Q9NYJ8 693 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ERAP1Q9NZ08 941 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CNOT8Q9UFF9 292 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 MAD2L2Q9UI95 211 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 NFE2L3Q9Y4A8 694 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 PEAK1Q9H792 1746 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ADAMTS7Q9UKP4 1686 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 AHDC1Q5TGY3 1603 aaPredicted RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CICQ96RK0 1608 aaPredicted RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 TONSLQ96HA7 1378 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 XDHP47989 1333 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 PEX12O00623 359 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CACNG3O60359 315 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CNOT3O75175 753 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 NDUFS3O75489 264 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 FTCDO95954 541 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 GBAP04062 536 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SRPRAP08240 638 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CCDC159P0C7I6 412 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ASMTP46597 345 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ASCL1P50553 236 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SCNN1GP51170 649 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CLCNKBP51801 687 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 GTF2A1P52655 376 aaPredicted RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 NXPH1P58417 271 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 BPIFB4P59827 614 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 B4GALNT1Q00973 533 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 IFT88Q13099 833 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 HSP90AB3PQ58FF7 597 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ARHGAP40Q5TG30 622 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SFRP1Q8N474 314 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms