RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CCDC74AQ96AQ1 378 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 LIN37Q96GY3 246 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 COX14Q96I36 57 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 OLFM3Q96PB7 478 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 WDR24Q96S15 920 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 TDRD1Q9BXT4 1180 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 NHEJ1Q9H9Q4 299 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 CYP4F12Q9HCS2 524 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 SPATS2LQ9NUQ6 558 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 ACSL6Q9UKU0 697 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 CNOT6Q9ULM6 557 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 DOLKQ9UPQ8 538 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 SATB2Q9UPW6 733 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 SHROOM3Q8TF72 1996 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 BPTFQ12830 3046 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 CCDC187A0A096LP49 1063 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 A0A0U1RQS6 177 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 PMS2P1A4D2B8 440 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 RGSL1A5PLK6 1076 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 CAPN8A6NHC0 703 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 ANKRD66B4E2M5 251 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 D6RAR5 112 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 TK2O00142 265 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 B4GAT1O43505 415 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 LCA5LO95447 670 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 HLA-DQB2P05538 268 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 KRT10P13645 584 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 CTPS1P17812 591 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 SSR1P43307 286 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 PCBP4P57723 403 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 B4GALNT1Q00973 533 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 EIF3IQ13347 325 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 ARHGEF7Q14155 803 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 SPIDRQ14159 915 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 MESDQ14696 234 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 CLPPQ16740 277 aaPredicted RBP9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 SARM1Q6SZW1 724 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 LRRC69Q6ZNQ3 347 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 SPRED1Q7Z699 444 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 TAF8Q7Z7C8 310 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 B3GNT8Q7Z7M8 397 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 SCAMP4Q969E2 229 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 CCDC42Q96M95 316 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 TRIB3Q96RU7 358 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 LGMNQ99538 433 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 DPH1Q9BZG8 443 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 LRRN3Q9H3W5 708 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 THSD1Q9NS62 852 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 ZNHIT6Q9NWK9 470 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 SIRPGQ9P1W8 387 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 DNPEPQ9ULA0 475 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 CHKBQ9Y259 395 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 PCDHGA7Q9Y5G6 932 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 RNF215Q9Y6U7 377 aa9.69□□□□□ -0.86
TMEM39A-210ENST00000490099 MGAQ8IWI9 3026 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 BAHCC1Q9P281 2608 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 KCNK1O00180 336 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 JCHAINP01591 159 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 PYGLP06737 847 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 ITGA2BP08514 1039 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 ADCY8P40145 1251 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 SLC1A1P43005 524 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 POLD2P49005 469 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 ZBTB17Q13105 803 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 SLC14A2Q15849 920 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 QPCTQ16769 361 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 PYCR3Q53H96 274 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 HENMT1Q5T8I9 393 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 CCNJLQ8IV13 435 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 CNGA4Q8IV77 575 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 SLITRK4Q8IW52 837 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 PAF1Q8N7H5 531 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 EXD1Q8NHP7 514 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 TMEM159Q96B96 161 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 AP2M1Q96CW1 435 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 EID2BQ96D98 161 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 IMP4Q96G21 291 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 TMEM74Q96NL1 305 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 GFM1Q96RP9 751 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 UBL7Q96S82 380 aaPredicted RBP9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 AGAP2Q99490 1192 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 GSDMCQ9BYG8 508 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 B3GNT4Q9C0J1 378 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 BRD8Q9H0E9 1235 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 CARS2Q9HA77 564 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 PCDH9Q9HC56 1237 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 SPTLC3Q9NUV7 552 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 HAUS2Q9NVX0 235 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 TAAR2Q9P1P5 351 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 LRIT1Q9P2V4 623 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 SUFUQ9UMX1 484 aa9.68□□□□□ -0.86
TMEM39A-210ENST00000490099 LRRD1A4D1F6 860 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 GOLGA6L3A6NEY3 463 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 PLD2O14939 933 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 ATXN7O15265 892 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 TNFSF15O95150 251 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms