RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CCDC173Q0VFZ6 552 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 SPIDRQ14159 915 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 PDK1Q15118 436 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 TCEAL1Q15170 157 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 QPCTQ16769 361 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 LRRC38Q5VT99 294 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 SLC30A9Q6PML9 568 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 SPOCD1Q6ZMY3 1216 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 MARK2Q7KZI7 788 aaKnown RBP13.97□□□□□ -0.17
VTI1A-206ENST00000489142 B3GNT8Q7Z7M8 397 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 NRROSQ86YC3 692 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 NDUFAF2Q8N183 169 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 GPR156Q8NFN8 814 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 HAUS1Q96CS2 278 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 FOXP3Q9BZS1 431 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 SPATS2LQ9NUQ6 558 aaKnown RBP13.97□□□□□ -0.17
VTI1A-206ENST00000489142 HAUS2Q9NVX0 235 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 DDX56Q9NY93 547 aaKnown RBP13.97□□□□□ -0.17
VTI1A-206ENST00000489142 ST14Q9Y5Y6 855 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 ALG6Q9Y672 507 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 A0A087WV48 116 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 RCCD1A6NED2 376 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 PDE2AO00408 941 aaPredicted RBP13.96□□□□□ -0.17
VTI1A-206ENST00000489142 PPP1R12AO14974 1030 aaPredicted RBP13.96□□□□□ -0.17
VTI1A-206ENST00000489142 CST8O60676 142 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 RPLP0P05388 317 aaKnown RBP13.96□□□□□ -0.17
VTI1A-206ENST00000489142 HOXB3P14651 431 aaPredicted RBP13.96□□□□□ -0.17
VTI1A-206ENST00000489142 ZNF30P17039 623 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 MAZP56270 477 aaKnown RBP13.96□□□□□ -0.17
VTI1A-206ENST00000489142 DPTQ07507 201 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 SPA17Q15506 151 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 TBC1D25Q3MII6 688 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 LYSMD3Q7Z3D4 306 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 PDZD3Q86UT5 571 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 SPATA22Q8NHS9 363 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 PATE1Q8WXA2 126 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 KRT35Q92764 455 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 POLR1BQ9H9Y6 1135 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 ATXN7L1Q9ULK2 861 aaPredicted RBP13.96□□□□□ -0.17
VTI1A-206ENST00000489142 RNF215Q9Y6U7 377 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 UNC13CQ8NB66 2214 aa13.96□□□□□ -0.17
VTI1A-206ENST00000489142 SCN8AQ9UQD0 1980 aa13.96□□□□□ -0.18
VTI1A-206ENST00000489142 LOC400499M0QZD8 3231 aa13.96□□□□□ -0.18
VTI1A-206ENST00000489142 A0A1W2PQM1 296 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 NTN3O00634 580 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 PSTPIP1O43586 416 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 LCA5LO95447 670 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 MT-CYBP00156 380 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 ATP1A1P05023 1023 aaKnown RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 ZFXP17010 805 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 PTPN3P26045 913 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 ACTN2P35609 894 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 ADCY8P40145 1251 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 CTBSQ01459 385 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 C14orf28Q4W4Y0 310 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 CERCAMQ5T4B2 595 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 ADAMTSL4Q6UY14 1074 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 NT5DC3Q86UY8 548 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 ZC3H18Q86VM9 953 aaKnown RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 VSIG1Q86XK7 387 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 CCNJLQ8IV13 435 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 CCDC50Q8IVM0 306 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 SNIP1Q8TAD8 396 aaKnown RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 GPBAR1Q8TDU6 330 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 ZDHHC1Q8WTX9 485 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 FGF11Q92914 225 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 IMP4Q96G21 291 aaKnown RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 HIC2Q96JB3 615 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 WDR24Q96S15 920 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 ANP32EQ9BTT0 268 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 MLPHQ9BV36 600 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 EPB41L5Q9HCM4 733 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 ARFGAP3Q9NP61 516 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 KCTD5Q9NXV2 234 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 UBP1Q9NZI7 540 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 TAAR2Q9P1P5 351 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 SHOC2Q9UQ13 582 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 SLC17A4Q9Y2C5 497 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 PRKAB1Q9Y478 270 aa13.95□□□□□ -0.18
VTI1A-206ENST00000489142 PCYT1BQ9Y5K3 369 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 OAS3Q9Y6K5 1087 aaKnown RBP13.95□□□□□ -0.18
VTI1A-206ENST00000489142 FADS2P1A8MWK0 482 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 ANKRD66B4E2M5 251 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 D6RAR5 112 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 PMPCBO75439 489 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 TCEA3O75764 348 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 ASMTLO95671 621 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 FGF1P05230 155 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 CYLC1P35663 651 aaPredicted RBP13.94□□□□□ -0.18
VTI1A-206ENST00000489142 ABCG1P45844 678 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 LSSP48449 732 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 HADHBP55084 474 aaKnown RBP13.94□□□□□ -0.18
VTI1A-206ENST00000489142 RPL26P61254 145 aaKnown RBP13.94□□□□□ -0.18
VTI1A-206ENST00000489142 ILF3Q12906 894 aaKnown RBP eCLIP13.94□□□□□ -0.18
VTI1A-206ENST00000489142 HLTFQ14527 1009 aaKnown RBP eCLIP13.94□□□□□ -0.18
VTI1A-206ENST00000489142 PRKD1Q15139 912 aaPredicted RBP13.94□□□□□ -0.18
VTI1A-206ENST00000489142 NOMO1Q15155 1222 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 TAZQ16635 292 aa13.94□□□□□ -0.18
VTI1A-206ENST00000489142 ALS2CLQ60I27 953 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms