RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CTSVO60911 334 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 CYC1P08574 325 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 TYMPP19971 482 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 AGAP20933 346 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 TLX1P31314 330 aaPredicted RBP2.46□□□□□ -2.02
CCDC93-209ENST00000488908 PRKAA2P54646 552 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 CHRNDQ07001 517 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 SPOCK1Q08629 439 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 TBX2Q13207 712 aaPredicted RBP2.46□□□□□ -2.02
CCDC93-209ENST00000488908 SNAI3Q3KNW1 292 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 TANGO2Q6ICL3 276 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 LRRC8EQ6NSJ5 796 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 METTL2BQ6P1Q9 378 aaKnown RBP2.46□□□□□ -2.02
CCDC93-209ENST00000488908 RSRC2Q7L4I2 434 aaKnown RBP2.46□□□□□ -2.02
CCDC93-209ENST00000488908 LINGO2Q7L985 606 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 OR2T6Q8NHC8 308 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 METTL2AQ96IZ6 378 aaKnown RBP2.46□□□□□ -2.02
CCDC93-209ENST00000488908 C18orf12Q96KH6 178 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 LMAN2LQ9H0V9 348 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 KCNN2Q9H2S1 579 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 DACT1Q9NYF0 836 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 ACSL5Q9ULC5 683 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 TTC7AQ9ULT0 858 aaPredicted RBP2.46□□□□□ -2.02
CCDC93-209ENST00000488908 EXOGQ9Y2C4 368 aaKnown RBP2.46□□□□□ -2.02
CCDC93-209ENST00000488908 CSAG2Q9Y5P2 127 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 DISP3Q9P2K9 1392 aa2.46□□□□□ -2.02
CCDC93-209ENST00000488908 PTPRCP08575 1304 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 PABPN1LA6NDY0 278 aaKnown RBP2.45□□□□□ -2.02
CCDC93-209ENST00000488908 TMEM202A6NGA9 273 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 BCAT2O15382 392 aaPredicted RBP2.45□□□□□ -2.02
CCDC93-209ENST00000488908 CEACAM1P13688 526 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 ZNF23P17027 643 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 CST5P28325 142 aaPredicted RBP2.45□□□□□ -2.02
CCDC93-209ENST00000488908 SHC1P29353 583 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 AHRP35869 848 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 NR2C2P49116 596 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 METAP2P50579 478 aaKnown RBP eCLIP2.45□□□□□ -2.02
CCDC93-209ENST00000488908 SLC45A4Q5BKX6 768 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 TRIM65Q6PJ69 517 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 C17orf99Q6UX52 265 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 ZNF704Q6ZNC4 412 aaPredicted RBP2.45□□□□□ -2.02
CCDC93-209ENST00000488908 FAM160B2Q86V87 743 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 GRHL3Q8TE85 626 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 FOXN4Q96NZ1 517 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 AGAP3Q96P47 875 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 RMDN3Q96TC7 470 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 PCYT2Q99447 389 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 NUF2Q9BZD4 464 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 EPHX3Q9H6B9 360 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 CHODLQ9H9P2 273 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 MMP25Q9NPA2 562 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 FBXO9Q9UK97 447 aaPredicted RBP2.45□□□□□ -2.02
CCDC93-209ENST00000488908 ACAD8Q9UKU7 415 aa2.45□□□□□ -2.02
CCDC93-209ENST00000488908 ZCWPW2A0A1B0GU75 182 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 SH2D7A6NKC9 451 aaPredicted RBP2.44□□□□□ -2.02
CCDC93-209ENST00000488908 A6NL46 340 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 PER2O15055 1255 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 ANP32CO43423 234 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 PLA2G4BP0C869 781 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 CCR10P46092 362 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 BMXP51813 675 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 PICALMQ13492 652 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 PEX6Q13608 980 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 PUM3Q15397 648 aaKnown RBP2.44□□□□□ -2.02
CCDC93-209ENST00000488908 TCTN1Q2MV58 587 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 TUBB8Q3ZCM7 444 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 SGO1Q5FBB7 561 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 GGNBP1Q5YKI7 109 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 KSR2Q6VAB6 950 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 LINC00612Q8N6U2 182 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 SENP5Q96HI0 755 aaPredicted RBP2.44□□□□□ -2.02
CCDC93-209ENST00000488908 CLSTN3Q9BQT9 956 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.44□□□□□ -2.02
CCDC93-209ENST00000488908 RAD21L1Q9H4I0 556 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 PPP1R3EQ9H7J1 279 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 MAGEE1Q9HCI5 957 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 GPR108Q9NPR9 543 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 PRO0461Q9UI25 63 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 GDAQ9Y2T3 454 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 PYGO1Q9Y3Y4 419 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 JRKLQ9Y4A0 524 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 KIAA1210Q9ULL0 1709 aa2.44□□□□□ -2.02
CCDC93-209ENST00000488908 PCNX3Q9H6A9 2034 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 STX16-NPEPL1H3BU86 382 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 STX16O14662 325 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 NR3C1P04150 777 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 EDN1P05305 212 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 CSF2RAP15509 400 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 PLIN5Q00G26 463 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 GRIK3Q13003 919 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 ENPP2Q13822 863 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 VEPH1Q14D04 833 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 KIAA1644Q3SXP7 199 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 CTXN3Q4LDR2 81 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 SERTAD4-AS1Q5TG53 156 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 ZDHHC20Q5W0Z9 365 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 DUS1LQ6P1R4 473 aaKnown RBP2.43□□□□□ -2.02
CCDC93-209ENST00000488908 BRAT1Q6PJG6 821 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 RAD9BQ6WBX8 426 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 GPAT4Q86UL3 456 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms