RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 SH3RF2Q8TEC5 729 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 PBXIP1Q96AQ6 731 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 MYEOVQ96EZ4 313 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 C3orf30Q96M34 536 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 CEP295NLQ96MC4 621 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 SEPT5Q99719 369 aaPredicted RBP14.18□□□□□ -0.14
ABCB1-207ENST00000488737 GPR62Q9BZJ7 368 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 ZNF696Q9H7X3 374 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 AKTIPQ9H8T0 292 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 VPS9D1Q9Y2B5 631 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 NDUFAF1Q9Y375 327 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 DNAJC15Q9Y5T4 150 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 LCHNA4D1U4 455 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 UBXN8O00124 270 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 ACSL4O60488 711 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 GJB3O75712 270 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 SOAT2O75908 522 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 MATN4O95460 622 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 VNN2O95498 520 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 ARSAP15289 507 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 GRIA2P42262 883 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 MRPL19P49406 292 aaKnown RBP14.18□□□□□ -0.14
ABCB1-207ENST00000488737 CDH4P55283 916 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 ELAVL2Q12926 359 aaKnown RBP14.18□□□□□ -0.14
ABCB1-207ENST00000488737 TAF1AQ15573 450 aaPredicted RBP14.18□□□□□ -0.14
ABCB1-207ENST00000488737 SPATS1Q496A3 300 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 COQ5Q5HYK3 327 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 C6orf10Q5SRN2 563 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 FUNDC1Q8IVP5 155 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 SPNS2Q8IVW8 549 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 RYBPQ8N488 228 aaPredicted RBP14.18□□□□□ -0.14
ABCB1-207ENST00000488737 TWIST2Q8WVJ9 160 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 ATP6V1E2Q96A05 226 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 ZFRQ96KR1 1074 aaKnown RBP14.18□□□□□ -0.14
ABCB1-207ENST00000488737 SH3GL3Q99963 347 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 HOPXQ9BPY8 73 aaPredicted RBP14.18□□□□□ -0.14
ABCB1-207ENST00000488737 EFHD1Q9BUP0 239 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 CCSER2Q9H7U1 834 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 MID1IP1Q9NPA3 183 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 TAS2R13Q9NYV9 303 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 UBAP1Q9NZ09 502 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 SLC27A5Q9Y2P5 690 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 COMMD3-BMI1R4GMX3 469 aa14.18□□□□□ -0.14
ABCB1-207ENST00000488737 SYCE1LA8MT33 242 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 H3BMM5 538 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 ZNF26P17031 533 aaPredicted RBP14.17□□□□□ -0.14
ABCB1-207ENST00000488737 TSPAN8P19075 237 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 CD9P21926 228 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 GSTT1P30711 240 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 CDH13P55290 713 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 ARPP19P56211 112 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 RAD51Q06609 339 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 PTPRCAPQ14761 206 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 PFKFB4Q16877 469 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 USP41Q3LFD5 358 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 RNF19BQ6ZMZ0 732 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 PHYKPLQ8IUZ5 450 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 ABI1Q8IZP0 508 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 MIER2Q8N344 545 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 TSPEARQ8WU66 669 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 EXT2Q93063 718 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 GLT1D1Q96MS3 346 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 GPATCH1Q9BRR8 931 aaKnown RBP14.17□□□□□ -0.14
ABCB1-207ENST00000488737 CINPQ9BW66 212 aaPredicted RBP14.17□□□□□ -0.14
ABCB1-207ENST00000488737 C1QTNF3Q9BXJ4 246 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 MRPS26Q9BYN8 205 aaKnown RBP14.17□□□□□ -0.14
ABCB1-207ENST00000488737 PCDHAC1Q9H158 963 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 CRISPLD1Q9H336 500 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 MARCH5Q9NX47 278 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 ABCD2Q9UBJ2 740 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 UBA2Q9UBT2 640 aaPredicted RBP14.17□□□□□ -0.14
ABCB1-207ENST00000488737 DNMT3LQ9UJW3 386 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 TMCO1Q9UM00 188 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 PADI4Q9UM07 663 aa14.17□□□□□ -0.14
ABCB1-207ENST00000488737 A0A0J9YYE9 177 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 ATP6AP2A0A1C7CYW4 349 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 SLC38A8A6NNN8 435 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 PIP5K1BO14986 540 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 KDELR3O43731 214 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 CLASP2O75122 1294 aaKnown RBP14.16□□□□□ -0.14
ABCB1-207ENST00000488737 ATP6AP2O75787 350 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 ALDH2P05091 517 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 GFAPP14136 432 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 LBPP18428 481 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 HDCP19113 662 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 CR2P20023 1033 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 RPL5P46777 297 aaKnown RBP14.16□□□□□ -0.14
ABCB1-207ENST00000488737 SLC11A2P49281 568 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 KCNQ1P51787 676 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 ATXN3P54252 364 aaPredicted RBP14.16□□□□□ -0.14
ABCB1-207ENST00000488737 LCP2Q13094 533 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 KIF19Q2TAC6 998 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 MAP7D1Q3KQU3 841 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 FUT10Q6P4F1 479 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 EFL1Q7Z2Z2 1120 aaKnown RBP14.16□□□□□ -0.14
ABCB1-207ENST00000488737 GOLM1Q8NBJ4 401 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 OR9I1Q8NGQ6 314 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 OVCA2Q8WZ82 227 aa14.16□□□□□ -0.14
ABCB1-207ENST00000488737 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms