RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RAMP2O60895 175 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 KRT34O76011 436 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 PSMD7P51665 324 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 CDH4P55283 916 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 RELAQ04206 551 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 POLD3Q15054 466 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-221ENST00000488111 AFMIDQ63HM1 303 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 NPAS3Q8IXF0 933 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 CARNMT1Q8N4J0 409 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.72□□□□□ -0.21
COPS7B-221ENST00000488111 TDRD5Q8NAT2 981 aaKnown RBP13.72□□□□□ -0.21
COPS7B-221ENST00000488111 GIPC3Q8TF64 312 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 TMIGD2Q96BF3 282 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 LRRC3BQ96PB8 259 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 RANBP9Q96S59 729 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 LIN28AQ9H9Z2 209 aaKnown RBP13.72□□□□□ -0.21
COPS7B-221ENST00000488111 PNPOQ9NVS9 261 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 EMCNQ9ULC0 261 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 RAD54BQ9Y620 910 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 UNC80Q8N2C7 3258 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 J3KR12 359 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 MAFKO60675 156 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 ZMPSTE24O75844 475 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 PAPLNO95428 1278 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 LATS1O95835 1130 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 TOP3BO95985 862 aaKnown RBP13.72□□□□□ -0.21
COPS7B-221ENST00000488111 SERPINE1P05121 402 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 SERPINB9P50453 376 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 MRPS22P82650 360 aaKnown RBP13.72□□□□□ -0.21
COPS7B-221ENST00000488111 TXNL4AP83876 142 aaKnown RBP13.72□□□□□ -0.21
COPS7B-221ENST00000488111 ATG14Q6ZNE5 492 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 RSPRY1Q96DX4 576 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 RTP4Q96DX8 246 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 SERPINI1Q99574 410 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 COPS7BQ9H9Q2 264 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-221ENST00000488111 VPS28Q9UK41 221 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 RNF11Q9Y3C5 154 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.71□□□□□ -0.21
COPS7B-221ENST00000488111 E2F8A0AVK6 867 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 FAM159BA6NKW6 160 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 CLDN11O75508 207 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 METTL18O95568 372 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 JCHAINP01591 159 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF24P17028 368 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 PSMC3P17980 439 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 NDST2P52849 883 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 NAA20P61599 178 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 ZBTB17Q13105 803 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 KLF10Q13118 480 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF177Q13360 481 aaPredicted RBP13.71□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF77Q15935 545 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 CCDC92Q53HC0 331 aaPredicted RBP13.71□□□□□ -0.21
COPS7B-221ENST00000488111 FSCBQ5H9T9 825 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 FAM78AQ5JUQ0 283 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 GRAMD4Q6IC98 578 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF567Q8N184 647 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 TRIML2Q8N7C3 387 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 OR7D4Q8NG98 312 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 COX4I2Q96KJ9 171 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 AGAP3Q96P47 875 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 PKP2Q99959 881 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 RAB6BQ9NRW1 208 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 IGSF9Q9P2J2 1179 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 IPO11Q9UI26 975 aaKnown RBP13.71□□□□□ -0.21
COPS7B-221ENST00000488111 WNT6Q9Y6F9 365 aa13.71□□□□□ -0.21
COPS7B-221ENST00000488111 A0A1B0GVM2 712 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 TCAF2A6NFQ2 919 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 H0Y626 953 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 H0YJX3 145 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 MATN2O00339 956 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 ZBTB14O43829 449 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 NCF2P19878 526 aaPredicted RBP13.71□□□□□ -0.22
COPS7B-221ENST00000488111 PTPN3P26045 913 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 MAPKAPK2P49137 400 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 TUBA4AP68366 448 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 C16orf72Q14CZ0 275 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 ZNF423Q2M1K9 1284 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 MROH9Q5TGP6 573 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 PID1Q7Z2X4 250 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 FAM217AQ8IXS0 508 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 WFDC5Q8TCV5 224 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 PPP4R1Q8TF05 950 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 DLG3Q92796 817 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 SPON2Q9BUD6 331 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 BRD8Q9H0E9 1235 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 BCAP29Q9UHQ4 241 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 CLEC4EQ9ULY5 219 aa13.71□□□□□ -0.22
COPS7B-221ENST00000488111 A0A1W2PPC1 479 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 TMEM247A6NEH6 219 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 GFRA2O00451 464 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 DCXO43602 365 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 GCATO75600 419 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 RHOCP08134 193 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 CCNCP24863 283 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 HOXD12P35452 270 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 LTBRP36941 435 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 FLOT2Q14254 428 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 PCLAFQ15004 111 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 ATAT1Q5SQI0 421 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 IL31Q6EBC2 164 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms