RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 A8MX80 341 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 HTRA2O43464 458 aaPredicted RBP20.29■□□□□ 0.84
TRIM8-204ENST00000487927 TCEA3O75764 348 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 ALPIP09923 528 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 PYGMP11217 842 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 CTSEP14091 401 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 MARCKSL1P49006 195 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 PDX1P52945 283 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 KIAA1024LP59773 190 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 POLR2LP62875 67 aaKnown RBP20.29■□□□□ 0.84
TRIM8-204ENST00000487927 ZNF235Q14590 738 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 ESRP1Q6NXG1 681 aaKnown RBP20.29■□□□□ 0.84
TRIM8-204ENST00000487927 LVRNQ6Q4G3 990 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 RBM44Q6ZP01 1051 aaKnown RBP20.29■□□□□ 0.84
TRIM8-204ENST00000487927 SPACA3Q8IXA5 215 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 LSMEM2Q8N112 164 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 ARL10Q8N8L6 244 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 OR1E3Q8WZA6 343 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 NUDCD1Q96RS6 583 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 MGME1Q9BQP7 344 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 LRRC1Q9BTT6 524 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 SIRPGQ9P1W8 387 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 B4GALT6Q9UBX8 382 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 RABGEF1Q9UJ41 708 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 SATB2Q9UPW6 733 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 EFR3BQ9Y2G0 817 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 PCDHGC4Q9Y5F7 938 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 DGKBQ9Y6T7 804 aa20.29■□□□□ 0.84
TRIM8-204ENST00000487927 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.28■□□□□ 0.84
TRIM8-204ENST00000487927 PMS2P1A4D2B8 440 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 FAM187AA6NFU0 413 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 SOCS5O75159 536 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 IL4RP24394 825 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 TRIM23P36406 574 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 HSPA9P38646 679 aaKnown RBP20.28■□□□□ 0.84
TRIM8-204ENST00000487927 PCBP4P57723 403 aaKnown RBP20.28■□□□□ 0.84
TRIM8-204ENST00000487927 VSNL1P62760 191 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 TLE3Q04726 772 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 ODF2Q5BJF6 829 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 C3orf38Q5JPI3 329 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 SDR16C5Q8N3Y7 309 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 PAF1Q8N7H5 531 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 ATL2Q8NHH9 583 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 PRR11Q96HE9 360 aaPredicted RBP20.28■□□□□ 0.84
TRIM8-204ENST00000487927 COQ10AQ96MF6 247 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 RBM15Q96T37 977 aaKnown RBP eCLIP20.28■□□□□ 0.84
TRIM8-204ENST00000487927 LGR4Q9BXB1 951 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 RAB17Q9H0T7 212 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 NOD2Q9HC29 1040 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 FGF22Q9HCT0 170 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 GULP1Q9UBP9 304 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 DOLKQ9UPQ8 538 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 UNC13CQ8NB66 2214 aa20.28■□□□□ 0.84
TRIM8-204ENST00000487927 NTN3O00634 580 aaPredicted RBP20.27■□□□□ 0.84
TRIM8-204ENST00000487927 TNFP01375 233 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 FNTAP49354 379 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 ERVPABLB-1P60509 514 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 MAXP61244 160 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 TRAF2Q12933 501 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 IGF2-ASQ6U949 168 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 GKN2Q86XP6 184 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 CPNE8Q86YQ8 564 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 ZNF248Q8NDW4 579 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 OR56A4Q8NGH8 313 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 FAM71BQ8TC56 605 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 SCG3Q8WXD2 468 aaKnown RBP20.27■□□□□ 0.84
TRIM8-204ENST00000487927 GRAMD1AQ96CP6 724 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 MRPL40Q9NQ50 206 aaKnown RBP20.27■□□□□ 0.84
TRIM8-204ENST00000487927 PCYOX1Q9UHG3 505 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 FEZ2Q9UHY8 353 aaPredicted RBP20.27■□□□□ 0.84
TRIM8-204ENST00000487927 GPR34Q9UPC5 381 aa20.27■□□□□ 0.84
TRIM8-204ENST00000487927 CACNB4O00305 520 aaPredicted RBP20.26■□□□□ 0.83
TRIM8-204ENST00000487927 HEXIM1O94992 359 aaKnown RBP20.26■□□□□ 0.83
TRIM8-204ENST00000487927 HOXC4P09017 264 aaPredicted RBP20.26■□□□□ 0.83
TRIM8-204ENST00000487927 CD48P09326 243 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 SSR1P43307 286 aaKnown RBP20.26■□□□□ 0.83
TRIM8-204ENST00000487927 TAS2R40P59535 323 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 MMRN1Q13201 1228 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 CUL1Q13616 776 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 ACOX1Q15067 660 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 CNGA3Q16281 694 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 PNCKQ6P2M8 343 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 VSIG1Q86XK7 387 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 CBARPQ8N350 705 aaPredicted RBP20.26■□□□□ 0.83
TRIM8-204ENST00000487927 ATPAF2Q8N5M1 289 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 CCDC74AQ96AQ1 378 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 NAF1Q96HR8 494 aaKnown RBP20.26■□□□□ 0.83
TRIM8-204ENST00000487927 FCRL3Q96P31 734 aaPredicted RBP20.26■□□□□ 0.83
TRIM8-204ENST00000487927 LGMNQ99538 433 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 AP1M1Q9BXS5 423 aa20.26■□□□□ 0.83
TRIM8-204ENST00000487927 MGAQ8IWI9 3026 aa20.25■□□□□ 0.83
TRIM8-204ENST00000487927 BHMG1C9JSJ3 638 aaPredicted RBP20.25■□□□□ 0.83
TRIM8-204ENST00000487927 CPP00450 1065 aa20.25■□□□□ 0.83
TRIM8-204ENST00000487927 LHCGRP22888 699 aa20.25■□□□□ 0.83
TRIM8-204ENST00000487927 VIPR1P32241 457 aa20.25■□□□□ 0.83
TRIM8-204ENST00000487927 SERPINB6P35237 376 aa20.25■□□□□ 0.83
TRIM8-204ENST00000487927 ARSEP51690 589 aa20.25■□□□□ 0.83
TRIM8-204ENST00000487927 CDH6P55285 790 aa20.25■□□□□ 0.83
TRIM8-204ENST00000487927 SPIDRQ14159 915 aa20.25■□□□□ 0.83
TRIM8-204ENST00000487927 PTPRRQ15256 657 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms