RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ME1P48163 572 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 CSRP3P50461 194 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 RIPPLY3P57055 190 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 IRX4P78413 519 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 RNASELQ05823 741 aaKnown RBP4.98□□□□□ -1.61
BRCA1-217ENST00000487825 DNASE1L3Q13609 305 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 HNRNPDQ14103 355 aaKnown RBP4.98□□□□□ -1.61
BRCA1-217ENST00000487825 DAG1Q14118 895 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 HSP90AB4PQ58FF6 505 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 CRTC1Q6UUV9 634 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 DEF8Q6ZN54 512 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 PLPPR4Q7Z2D5 763 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 GPR65Q8IYL9 337 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 KBTBD3Q8NAB2 608 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 NSMCE1Q8WV22 266 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 IGFBPL1Q8WX77 278 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 ING5Q8WYH8 240 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 KIF1BPQ96EK5 621 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 VCPIP1Q96JH7 1222 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 TRMT61BQ9BVS5 477 aaKnown RBP4.98□□□□□ -1.61
BRCA1-217ENST00000487825 AZI2Q9H6S1 392 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.98□□□□□ -1.61
BRCA1-217ENST00000487825 DACT1Q9NYF0 836 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 FNIP2Q9P278 1114 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 TNNQ9UQP3 1299 aa4.98□□□□□ -1.61
BRCA1-217ENST00000487825 HEMK1Q9Y5R4 338 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-217ENST00000487825 UTP20O75691 2785 aaKnown RBP4.98□□□□□ -1.61
BRCA1-217ENST00000487825 TP53BP1Q12888 1972 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-217ENST00000487825 C16orf96A6NNT2 1141 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 H3BNX3 289 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 CCL16O15467 120 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 INSIG1O15503 277 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 RNF113AO15541 343 aaKnown RBP4.97□□□□□ -1.61
BRCA1-217ENST00000487825 PLAUP00749 431 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 VTNP04004 478 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 ZFYP08048 801 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-217ENST00000487825 PSMC3P17980 439 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 GDI1P31150 447 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 SLC26A2P50443 739 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 HSF1Q00613 529 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 GPS1Q13098 491 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 ACOX1Q15067 660 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 ASPRV1Q53RT3 343 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 PPM1LQ5SGD2 360 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 LIN9Q5TKA1 542 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 PMS2CLQ68D20 193 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 VITQ6UXI7 678 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 ZNF517Q6ZMY9 492 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-217ENST00000487825 TFAP2DQ7Z6R9 452 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 FMNL3Q8IVF7 1028 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 KRT78Q8N1N4 520 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 TMEM57Q8N5G2 664 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.97□□□□□ -1.61
BRCA1-217ENST00000487825 ATP11CQ8NB49 1132 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 DEPDC1BQ8WUY9 529 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 MCRS1Q96EZ8 462 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 CDHR1Q96JP9 859 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 FCRL5Q96RD9 977 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 MLXIPLQ9NP71 852 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 GJB4Q9NTQ9 266 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 HCFC1R1Q9NWW0 138 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 SIRT4Q9Y6E7 314 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-217ENST00000487825 ITPR2Q14571 2701 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 KNTC1P50748 2209 aa4.97□□□□□ -1.61
BRCA1-217ENST00000487825 USP9YO00507 2555 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-217ENST00000487825 ANK1P16157 1881 aa4.96□□□□□ -1.61
BRCA1-217ENST00000487825 MYBPHLA2RUH7 354 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 POM121BA6NF01 834 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 C2CD4BA6NLJ0 364 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 ZBTB5O15062 677 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 KPNA5O15131 536 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 DHX16O60231 1041 aaKnown RBP4.96□□□□□ -1.62
BRCA1-217ENST00000487825 HBP1O60381 514 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 CNOT3O75175 753 aaKnown RBP4.96□□□□□ -1.62
BRCA1-217ENST00000487825 COQ9O75208 318 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 C22orf31O95567 290 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 CD63P08962 238 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 PSG1P11464 419 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 GP1BBP13224 206 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 CEBPBP17676 345 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 DRD1P21728 446 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 VPS41P49754 854 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 NLRP11P59045 1033 aaKnown RBP4.96□□□□□ -1.62
BRCA1-217ENST00000487825 CNGA3Q16281 694 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 SLC5A9Q2M3M2 681 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 EARS2Q5JPH6 523 aaKnown RBP4.96□□□□□ -1.62
BRCA1-217ENST00000487825 ABLIM2Q6H8Q1 611 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 ZNF793Q6ZN11 406 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 SAMD14Q8IZD0 417 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-217ENST00000487825 CCDC33Q8N5R6 958 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 URGCPQ8TCY9 931 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 ABHD5Q8WTS1 349 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 PIGKQ92643 395 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 TRMT61AQ96FX7 289 aaKnown RBP4.96□□□□□ -1.62
BRCA1-217ENST00000487825 SEC62Q99442 399 aaKnown RBP4.96□□□□□ -1.62
BRCA1-217ENST00000487825 C8orf33Q9H7E9 229 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-217ENST00000487825 ZBTB26Q9HCK0 441 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 AGO4Q9HCK5 861 aaKnown RBP4.96□□□□□ -1.62
BRCA1-217ENST00000487825 ZFP14Q9HCL3 533 aa4.96□□□□□ -1.62
BRCA1-217ENST00000487825 SEMA5BQ9P283 1151 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms