RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ERRFI1Q9UJM3 462 aaPredicted RBP3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 PCDHGB4Q9UN71 923 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 SNX8Q9Y5X2 465 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 A0A1W2PQ09 198 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 RPS10-NUDT3A0A1W2PQS6 291 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 AKR1B15C9JRZ8 316 aaPredicted RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 VWA5AO00534 786 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 WNT9BO14905 357 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 GRID2O43424 1007 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 ITM2AO43736 263 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 HS6ST1O60243 411 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 SOX30O94993 753 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 STARD3NLO95772 234 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 LCATP04180 440 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 NAGAP17050 411 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 GABRB1P18505 474 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 GCH1P30793 250 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 HOXA11P31270 313 aaPredicted RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 HOXA13P31271 388 aaPredicted RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 ACSL1P33121 698 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 PIGAP37287 484 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 CLCN3P51790 818 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 GALCP54803 685 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 PPATQ06203 517 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 TRAF1Q13077 416 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 MYBPC2Q14324 1141 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 NAB2Q15742 525 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 MMEL1Q495T6 779 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 CDONQ4KMG0 1287 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 DNTTIP2Q5QJE6 756 aaKnown RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 KIAA0930Q6ICG6 404 aaPredicted RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 PQLC2Q6ZP29 291 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 MIGA1Q8NAN2 632 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 OR14L1PQ8NHC6 308 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 RRNAD1Q96FB5 475 aaKnown RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 PPP1R13BQ96KQ4 1090 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 MEIS3Q99687 375 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 SEPT5Q99719 369 aaPredicted RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 MXD3Q9BW11 206 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 ESRP2Q9H6T0 727 aaKnown RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 SLC28A3Q9HAS3 691 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 MKKSQ9NPJ1 570 aaPredicted RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 GPR108Q9NPR9 543 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 PLSCR4Q9NRQ2 329 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 ANKEF1Q9NU02 776 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 OR6C3Q9NZP0 311 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 OGFRQ9NZT2 677 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 SUCLA2Q9P2R7 463 aaPredicted RBP3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 FBXL17Q9UF56 701 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 NRBP1Q9UHY1 535 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 RPS6KA6Q9UK32 745 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 PAM16Q9Y3D7 125 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 STON1Q9Y6Q2 735 aa3.59□□□□□ -1.83
SNRNP27-204ENST00000487029 BECN2A8MW95 431 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 SPRY3O43610 288 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 DAB1O75553 588 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 JRKO75564 520 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 BEST1O76090 585 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 FTCDO95954 541 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 PLGP00747 810 aaPredicted RBP3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 SRPRAP08240 638 aaKnown RBP3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 HOXB2P14652 356 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 AKR1B1P15121 316 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 MAOAP21397 527 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 RFX2P48378 723 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 RFX5P48382 616 aaPredicted RBP3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 CAMPP49913 170 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 METAP2P50579 478 aaKnown RBP eCLIP3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 PMS2P54278 862 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 RAD23BP54727 409 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 ACSM2AQ08AH3 577 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 STK4Q13043 487 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 CTTNQ14247 550 aaKnown RBP3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 HNF4GQ14541 408 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 PCGF3Q3KNV8 242 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 FSCBQ5H9T9 825 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 ACSM2BQ68CK6 577 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 ANKRD54Q6NXT1 300 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 METTL2BQ6P1Q9 378 aaKnown RBP3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 SHFQ7M4L6 423 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 GALNT5Q7Z7M9 940 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 HACE1Q8IYU2 909 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 OR8H2Q8N162 312 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 AADATQ8N5Z0 425 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 IGSF8Q969P0 613 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 JAKMIP2Q96AA8 810 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 ERP27Q96DN0 273 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 ELMOD3Q96FG2 381 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 METTL2AQ96IZ6 378 aaKnown RBP3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 OR2A14Q96R47 310 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 SERINC2Q96SA4 455 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 ACOX2Q99424 681 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 PCGF1Q9BSM1 259 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 NDST4Q9H3R1 872 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 PLK3Q9H4B4 646 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 HINT3Q9NQE9 182 aaKnown RBP3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 SETD4Q9NVD3 440 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 NKIRAS2Q9NYR9 191 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 SELENONQ9NZV5 590 aa3.58□□□□□ -1.84
SNRNP27-204ENST00000487029 RCOR1Q9UKL0 485 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms