RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CXXC1Q9P0U4 656 aaPredicted RBP11.93□□□□□ -0.5
PKP4-213ENST00000486254 MED16Q9Y2X0 877 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 FCF1Q9Y324 198 aaKnown RBP11.93□□□□□ -0.5
PKP4-213ENST00000486254 NOTCH4Q99466 2003 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 NUP210Q8TEM1 1887 aaPredicted RBP11.93□□□□□ -0.5
PKP4-213ENST00000486254 TRBV5-4A0A0C4DH59 114 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 SYCE1LA8MT33 242 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 PRR5-ARHGAP8B1AHC4 643 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 CCL22O00626 93 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 GRID2O43424 1007 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 DIAPH2O60879 1101 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 KERAO60938 352 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 SMIM24O75264 130 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 MOSPD3O75425 235 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 VPS26AO75436 327 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 LMNAP02545 664 aaKnown RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 CHRNGP07510 517 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 PIRTP0C851 137 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 PKMP14618 531 aaKnown RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 MPSTP25325 297 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 SERPINA4P29622 427 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 MC4RP32245 332 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 EPHB1P54762 984 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 SNRPD1P62314 119 aaKnown RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 HERVK_113P63132 956 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ARHGAP8P85298 464 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 XIAPP98170 497 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 BCL2L1Q07817 233 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 PEX6Q13608 980 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 CRY1Q16526 586 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 PITRM1Q5JRX3 1037 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 GPR158Q5T848 1215 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ZDHHC20Q5W0Z9 365 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 UGT3A1Q6NUS8 523 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 HOMEZQ8IX15 550 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 APCDD1Q8J025 514 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 DNAJC5GQ8N7S2 189 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 POF1BQ8WVV4 589 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 BADQ92934 168 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 PDLIM5Q96HC4 596 aaKnown RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 BIRC8Q96P09 236 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ATOH8Q96SQ7 321 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 TTC1Q99614 292 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ERVK-6Q9BXR3 956 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ZNF385DQ9H6B1 395 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ARMCX1Q9P291 453 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 APPL1Q9UKG1 709 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 CRYL1Q9Y2S2 319 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 PCDHB9Q9Y5E1 797 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 LINC01553A4QN01 128 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 HIDE1A8MVS5 230 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 H3BMM5 538 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ZNF197O14709 1029 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 SLC9A3R1O14745 358 aaPredicted RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 GRM6O15303 877 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 CCL16O15467 120 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 KLK8O60259 260 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ZNF821O75541 412 aaPredicted RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 SRP72O76094 671 aaKnown RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 MT-CO1P00395 513 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 CA8P35219 290 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 CCR2P41597 374 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 COPAP53621 1224 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ALDH18A1P54886 795 aaKnown RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 RAD51Q06609 339 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ZNF77Q15935 545 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 GPR33Q49SQ1 333 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 PRSS36Q5K4E3 855 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 KIAA0907Q7Z7F0 614 aaPredicted RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 LDB1Q86U70 411 aaPredicted RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ENDOVQ8N8Q3 282 aaKnown RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 STAG3L4Q8TBR4 150 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ACTRT2Q8TDY3 377 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 SLC22A17Q8WUG5 538 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 MCUR1Q96AQ8 359 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 ZNF641Q96N77 438 aaPredicted RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 MCCC1Q96RQ3 725 aaPredicted RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 P2RY12Q9H244 342 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 MAN1C1Q9NR34 630 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 TDP1Q9NUW8 608 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 BAIAP2L1Q9UHR4 511 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 FKBPLQ9UIM3 349 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 INTS6Q9UL03 887 aaKnown RBP11.92□□□□□ -0.5
PKP4-213ENST00000486254 CDYLQ9Y232 598 aa11.92□□□□□ -0.5
PKP4-213ENST00000486254 AGAP14A8MT82 685 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 WASH3PC4AMC7 463 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 STX16-NPEPL1H3BU86 382 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 STX16O14662 325 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 RHOBTB1O94844 696 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 ENO1P06733 434 aaKnown RBP11.91□□□□□ -0.5
PKP4-213ENST00000486254 RHOP08100 348 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 SRCP12931 536 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 HLA-FP30511 346 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 CD70P32970 193 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 CDC16Q13042 620 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 PTPRCAPQ14761 206 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 NAA25Q14CX7 972 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 CDKN3Q16667 212 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms