RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SNRNP25Q9BV90 132 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 PRORYQ9H606 182 aa9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 PPCSQ9HAB8 311 aa9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 DYRK4Q9NR20 520 aa9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 MBNL1Q9NR56 388 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 GPR27Q9NS67 375 aa9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 VPS18Q9P253 973 aa9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 PPARGC1AQ9UBK2 798 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 ADAM21Q9UKJ8 722 aa9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 ATP8A1Q9Y2Q0 1164 aa9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 NFS1Q9Y697 457 aa9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 SMG1Q96Q15 3661 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-208ENST00000486159 LRRK1Q38SD2 2015 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 C16orf96A6NNT2 1141 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 HACD1B0YJ81 288 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 MAGEC1O60732 1142 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 MMP20O60882 483 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 GCATO75600 419 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 C1QL1O75973 258 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 PRKCGP05129 697 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 ABHD2P08910 425 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 RBP3P10745 1247 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 TSHRP16473 764 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 HTR7P34969 479 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 HNF1BP35680 557 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 ABCG1P45844 678 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 RECQLP46063 649 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 ADCY2Q08462 1091 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 IFFO1Q0D2I5 559 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 OVGP1Q12889 678 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 LLGL1Q15334 1064 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 CDKN3Q16667 212 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 DEFB133Q30KQ1 61 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 EFHC2Q5JST6 749 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 PERM1Q5SV97 790 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 CEP85LQ5SZL2 805 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 CDCP2Q5VXM1 449 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 KCTD16Q68DU8 428 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 RETSATQ6NUM9 610 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 NEK5Q6P3R8 708 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 GUSBP11Q6P575 273 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 PCSK4Q6UW60 755 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 PPP1R21Q6ZMI0 780 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 CDKL3Q8IVW4 592 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 PCDH20Q8N6Y1 951 aaKnown RBP9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 PLD5Q8N7P1 536 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 DCBLD1Q8N8Z6 715 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 ZNF548Q8NEK5 533 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 FEM1CQ96JP0 617 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 EXOC2Q96KP1 924 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 ATP6V1G3Q96LB4 118 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 CCDC77Q9BR77 488 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 NRSN2Q9GZP1 204 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 TMBIM4Q9HC24 238 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 GPATCH2LQ9NWQ4 482 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 FZD10Q9ULW2 581 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 AP4E1Q9UPM8 1137 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 COQ6Q9Y2Z9 468 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 HS3ST3A1Q9Y663 406 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 KNTC1P50748 2209 aa9.44□□□□□ -0.9
TMEM39A-208ENST00000486159 SPTY2D1-AS1A0A0U1RR47 76 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 TP73O15350 636 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 RIPK2O43353 540 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 TCEA3O75764 348 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 KRT38O76015 456 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 PIGNO95427 931 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 TTC4O95801 387 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 IVLP07476 585 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 CD48P09326 243 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 CKMT1AP12532 417 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 TIMP2P16035 220 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 RHOQP17081 205 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 IL4RP24394 825 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 ATP5DP30049 168 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 IGFALSP35858 605 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 NUDT1P36639 197 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 RPS21P63220 83 aaKnown RBP9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 SKOR1P84550 965 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 ZNF844Q08AG5 666 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 GPS1Q13098 491 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 MTA1Q13330 715 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 PDE1CQ14123 709 aaPredicted RBP9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 CYTH1Q15438 398 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 MYLK3Q32MK0 819 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 P3H1Q32P28 736 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 ACBD5Q5T8D3 534 aaPredicted RBP9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 DARS2Q6PI48 645 aaKnown RBP9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 KYAT3Q6YP21 454 aaKnown RBP9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 ZNF783Q6ZMS7 281 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 PPIL6Q8IXY8 311 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 CNPY4Q8N129 248 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 IFI44Q8TCB0 444 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 LMX1AQ8TE12 382 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 CENPTQ96BT3 561 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 HMCESQ96FZ2 354 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 PGM2Q96G03 612 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 NSMCE3Q96MG7 304 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 WRAP53Q9BUR4 548 aaKnown RBP9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 C1QTNF2Q9BXJ5 285 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 KRTAP3-3Q9BYR6 98 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms