RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SKOR1P84550 965 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 DSC2Q02487 901 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 ITKQ08881 620 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 XRCC4Q13426 336 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 ACOX1Q15067 660 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 NR0B2Q15466 257 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 PPP2R5EQ16537 467 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 DEFB133Q30KQ1 61 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 ODF2Q5BJF6 829 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 ZFYVE27Q5T4F4 411 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 HES3Q5TGS1 186 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 ADAMTSL4Q6UY14 1074 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 Q6ZVL8 140 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 HSD11B1LQ7Z5J1 315 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 NT5DC3Q86UY8 548 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 LSMEM2Q8N112 164 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 ARL10Q8N8L6 244 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 PDCD6IPQ8WUM4 868 aaKnown RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 ZCCHC14Q8WYQ9 949 aaKnown RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 TSACCQ96A04 125 aaPredicted RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 NUS1Q96E22 293 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 IMP4Q96G21 291 aaKnown RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 RBM41Q96IZ5 413 aaKnown RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 TEKT5Q96M29 485 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 MLPHQ9BV36 600 aaPredicted RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 LGR4Q9BXB1 951 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 ADGRE3Q9BY15 652 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 ABCG8Q9H221 673 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 TCEAL2Q9H3H9 227 aaPredicted RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 WDR26Q9H7D7 661 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 MAGEE1Q9HCI5 957 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 PHPT1Q9NRX4 125 aaPredicted RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 KLQ9UEF7 1012 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 APPL1Q9UKG1 709 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 CHKBQ9Y259 395 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 SLC17A4Q9Y2C5 497 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS50-218ENST00000485994 OR1A2Q9Y585 309 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 PCDHA3Q9Y5H8 950 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 ADAMTS20P59510 1910 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 hCG_1818297A0A087WSY0 165 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 A0A087WV48 116 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 LOC285095A0A1B0GVY8 99 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 PRSS38A1L453 326 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 CCDC66A2RUB6 948 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 CAPN8A6NHC0 703 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 TMX2-CTNND1H3BSU7 103 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 APOC4-APOC2K7ER74 178 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 KCNK1O00180 336 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 SPOPO43791 374 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 NUDT21O43809 227 aaKnown RBP6.98□□□□□ -1.29
VPS50-218ENST00000485994 CST8O60676 142 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 ZNF189O75820 626 aaPredicted RBP6.98□□□□□ -1.29
VPS50-218ENST00000485994 SOD1P00441 154 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 APOC2P02655 101 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 FUCA1P04066 466 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 PCCBP05166 539 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 GLB1P16278 677 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 PTPN7P35236 360 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 GJC1P36383 396 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 ETV3P41162 512 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 LSSP48449 732 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 EPHB1P54762 984 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 SEMG2Q02383 582 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 CDK18Q07002 472 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 CYP4F3Q08477 520 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 AP1B1Q10567 949 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 ZBTB17Q13105 803 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 SQSTM1Q13501 440 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 C1orf61Q13536 156 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 PRKD1Q15139 912 aaPredicted RBP6.98□□□□□ -1.29
VPS50-218ENST00000485994 CLPPQ16740 277 aaPredicted RBP6.98□□□□□ -1.29
VPS50-218ENST00000485994 QPCTQ16769 361 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 LRRC66Q68CR7 880 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 KDM7AQ6ZMT4 941 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 SPOCD1Q6ZMY3 1216 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 BBS12Q6ZW61 710 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 TMC3Q7Z5M5 1100 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 RFX6Q8HWS3 928 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 HID1Q8IV36 788 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 SLC35F3Q8IY50 421 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 RBFAQ8N0V3 343 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 PELI3Q8N2H9 469 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 TXLNBQ8N3L3 684 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 PAF1Q8N7H5 531 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 IFI44Q8TCB0 444 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 CCHCR1Q8TD31 782 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 OR1E3Q8WZA6 343 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 P3H4Q92791 437 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 NXPE2Q96DL1 559 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 COX14Q96I36 57 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 MRGPRX2Q96LB1 330 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 DEPDC7Q96QD5 511 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 TRIB3Q96RU7 358 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 WDR24Q96S15 920 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 C19orf43Q9BQ61 176 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 FRMD8Q9BZ67 464 aaPredicted RBP6.98□□□□□ -1.29
VPS50-218ENST00000485994 ABCG4Q9H172 646 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 GLOD4Q9HC38 313 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms