RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 CTSAP10619 480 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 HAPLN1P10915 354 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 H2AFXP16104 143 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 ATP2A2P16615 1042 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 YWHAQP27348 245 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 HOXA9P31269 272 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 STIP1P31948 543 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CDKN2BP42772 138 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 ABCG1P45844 678 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CXCR3P49682 368 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 SULT1E1P49888 294 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 DNA2P51530 1060 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 YWHAGP61981 247 aaKnown RBP eCLIP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 SIM1P81133 766 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 COG7P83436 770 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 MXRA7P84157 204 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 NHLH1Q02575 133 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 DEUP1Q05D60 604 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CALCOCO2Q13137 446 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 KLF1Q13351 362 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 BYSLQ13895 437 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 ZNF169Q14929 603 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 PPP1R7Q15435 360 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 ELF2Q15723 593 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 TAF12Q16514 161 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 MGAT5BQ3V5L5 792 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CCDC14Q49A88 953 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 DCAF12L1Q5VU92 463 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 SNX30Q5VWJ9 437 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 ARMC3Q5W041 872 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 BSPRYQ5W0U4 402 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 NUGGCQ68CJ6 796 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CCDC137Q6PK04 289 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 ESPNLQ6ZVH7 1005 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 BBS12Q6ZW61 710 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 BNIPLQ7Z465 357 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CROCCP2Q86T23 111 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CEP57Q86XR8 500 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CDKL3Q8IVW4 592 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 UNC45BQ8IWX7 931 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CCDC105Q8IYK2 499 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 TCEAL8Q8IYN2 117 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 ELMOD1Q8N336 334 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 HASPINQ8TF76 798 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 SCARB1Q8WTV0 552 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 HDAC7Q8WUI4 952 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 RIN2Q8WYP3 895 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 SMG7Q92540 1137 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 P3H4Q92791 437 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 PPP2R3CQ969Q6 453 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 LRRC45Q96CN5 670 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 FAF2Q96CS3 445 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 C1orf74Q96LT6 269 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 Q96MF0 132 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 GCNAQ96QF7 691 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 HAPLN3Q96S86 360 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 KRT12Q99456 494 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 NEU1Q99519 415 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 DDX50Q9BQ39 737 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 SLC29A3Q9BZD2 475 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 ULBP1Q9BZM6 244 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 LMAN2LQ9H0V9 348 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 OSBPL2Q9H1P3 480 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CATSPERBQ9H7T0 1116 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 VIPAS39Q9H9C1 493 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 SEMA4GQ9NTN9 838 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 RBM12Q9NTZ6 932 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 DDIT4Q9NX09 232 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 FBXW11Q9UKB1 542 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 PACSIN2Q9UNF0 486 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 DRG1Q9Y295 367 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 HBS1LQ9Y450 684 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 NME7Q9Y5B8 376 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 CDY1Q9Y6F8 540 aa4.4□□□□□ -1.71
SPTA1-206ENST00000484520 MRPL42Q9Y6G3 142 aaKnown RBP4.4□□□□□ -1.71
SPTA1-206ENST00000484520 EVPLQ92817 2033 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 hCG_1818297A0A087WSY0 165 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 AP3B1O00203 1094 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 TULP2O00295 520 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 CLDN5O00501 218 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 MGST3O14880 152 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 LIASO43766 372 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 NRP2O60462 931 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 C1QL1O75973 258 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 FGF18O76093 207 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 HEXIM1O94992 359 aaKnown RBP4.39□□□□□ -1.71
SPTA1-206ENST00000484520 CALCAP01258 141 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 IGLV3-25P01717 112 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 ZDHHC11BP0C7U3 371 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 SRGAP2BP0DMP2 458 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 FDXRP22570 491 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 KDELR1P24390 212 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 CYP2F1P24903 491 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 FLT3P36888 993 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 COILP38432 576 aaPredicted RBP4.39□□□□□ -1.71
SPTA1-206ENST00000484520 ARSEP51690 589 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 VCPP55072 806 aaKnown RBP4.39□□□□□ -1.71
SPTA1-206ENST00000484520 CDH6P55285 790 aa4.39□□□□□ -1.71
SPTA1-206ENST00000484520 HDAC4P56524 1084 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms