RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 KCTD11Q693B1 232 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 MARK2Q7KZI7 788 aaKnown RBP6.96□□□□□ -1.3
BRCA1-216ENST00000484087 CCDC117Q8IWD4 279 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-216ENST00000484087 C4orf33Q8N1A6 199 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 ANKS4BQ8N8V4 417 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 OR52K1Q8NGK4 314 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 GRIN3AQ8TCU5 1115 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 GANCQ8TET4 914 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 FRS2Q8WU20 508 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 MAGEB18Q96M61 343 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF599Q96NL3 588 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 FAM129BQ96TA1 746 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 TBL1YQ9BQ87 522 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 GTPBP2Q9BX10 602 aaKnown RBP6.96□□□□□ -1.3
BRCA1-216ENST00000484087 TM6SF2Q9BZW4 377 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 SLC25A51Q9H1U9 297 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 MAGEH1Q9H213 219 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 RABEP2Q9H5N1 569 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 ATP13A1Q9HD20 1204 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 VPS45Q9NRW7 570 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 SYBUQ9NX95 663 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 NSMCE4AQ9NXX6 385 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 ZFATQ9P243 1243 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 EIF2B4Q9UI10 523 aaKnown RBP6.96□□□□□ -1.3
BRCA1-216ENST00000484087 CACNA1AO00555 2505 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 NCOR2Q9Y618 2525 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 LRRK1Q38SD2 2015 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 FAM237BA0A1B0GVD1 139 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 C4orf47A7E2U8 309 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 TRIM49D1C9J1S8 452 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 COPEO14579 308 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 WNT9AO14904 365 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 GIPC1O14908 333 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 ATP9BO43861 1147 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 NDUFS2O75306 463 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 USP12O75317 370 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 SPAG7O75391 227 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CLDN11O75508 207 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 GJB3O75712 270 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 KIAA0754O94854 1291 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 FSBPO95073 299 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CD160O95971 181 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 IL1BP01584 269 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 DNTTP04053 509 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF806P0C7X5 589 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 NEFHP12036 1026 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CREB1P16220 341 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 ENGP17813 658 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CD68P34810 354 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 DRD3P35462 400 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 LAMB3Q13751 1172 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 FRG1Q14331 258 aaKnown RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF235Q14590 738 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 DLG2Q15700 870 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CST6Q15828 149 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 UAP1L1Q3KQV9 507 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 LRRC73Q5JTD7 316 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 LCE2AQ5TA79 106 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF776Q68DI1 518 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 IL31Q6EBC2 164 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 ARHGAP36Q6ZRI8 547 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 PRPF39Q86UA1 669 aaKnown RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CACNA2D3Q8IZS8 1091 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 AGGF1Q8N302 714 aaeCLIP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 MPP5Q8N3R9 675 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 PPHLN1Q8NEY8 458 aaKnown RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 IPMKQ8NFU5 416 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 GDAP1Q8TB36 358 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 PRR7Q8TB68 274 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 LRRC8CQ8TDW0 803 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CKAP2Q8WWK9 683 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF669Q96BR6 464 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 GRAMD1AQ96CP6 724 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 HMCESQ96FZ2 354 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CERS2Q96G23 380 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 APOPT1Q96IL0 206 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 EXOC2Q96KP1 924 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 UCN2Q96RP3 112 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 MYOCQ99972 504 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 MLPHQ9BV36 600 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 RSPH9Q9H1X1 276 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 NOL6Q9H6R4 1146 aaKnown RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 EBF2Q9HAK2 575 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 NT5MQ9NPB1 228 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 ITM2CQ9NQX7 267 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 PIH1D1Q9NWS0 290 aaKnown RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 FBXL12Q9NXK8 326 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 MOCS1Q9NZB8 636 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 UBP1Q9NZI7 540 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 SLC25A13Q9UJS0 675 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 PILRBQ9UKJ0 227 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
BRCA1-216ENST00000484087 CA5BQ9Y2D0 317 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D30Q9Y2I9 924 aa6.95□□□□□ -1.3
BRCA1-216ENST00000484087 EDDM13A0A1B0GTR0 161 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 A0A1W2PPM1 405 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 TCP11X1B4DZS4 312 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 CDX4O14627 284 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 TIMM44O43615 452 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms