RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 THOC1Q96FV9 657 aaKnown RBP26.17■■□□□ 1.78
SHOX2-204ENST00000483851 UBXN10Q96LJ8 280 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 GPR78Q96P69 363 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 AARSD1Q9BTE6 412 aaKnown RBP26.17■■□□□ 1.78
SHOX2-204ENST00000483851 APOL5Q9BWW9 433 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 OSBPL1AQ9BXW6 950 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 TRIM55Q9BYV6 548 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 MYLK2Q9H1R3 596 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 GPAMQ9HCL2 828 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 CRYL1Q9Y2S2 319 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 SLC4A1P02730 911 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 FGF3P11487 239 aaPredicted RBP26.17■■□□□ 1.78
SHOX2-204ENST00000483851 NQO1P15559 274 aaKnown RBP26.17■■□□□ 1.78
SHOX2-204ENST00000483851 NFKBIAP25963 317 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 PPARGP37231 505 aaPredicted RBP26.17■■□□□ 1.78
SHOX2-204ENST00000483851 OCRLQ01968 901 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 GAB4Q2WGN9 574 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 GRAMD4Q6IC98 578 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 PARP9Q8IXQ6 854 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 STK40Q8N2I9 435 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 EID2BQ96D98 161 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 CIPCQ9C0C6 399 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 ARHGEF3Q9NR81 526 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 ELOVL2Q9NXB9 296 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 SLC30A1Q9Y6M5 507 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 ZNF106Q9H2Y7 1883 aaKnown RBP26.16■■□□□ 1.78
SHOX2-204ENST00000483851 G3V2L1 256 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 DCTN3O75935 186 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 ST8SIA6P61647 398 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 PTPRNQ16849 979 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 TANGO2Q6ICL3 276 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 KLC3Q6P597 504 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 VITQ6UXI7 678 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 C12orf40Q86WS4 652 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 ZSWIM9Q86XI8 627 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 TMEM151AQ8N4L1 468 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 CPA6Q8N4T0 437 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 OR6Y1Q8NGX8 325 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 MRPL57Q9BQC6 102 aaKnown RBP26.16■■□□□ 1.78
SHOX2-204ENST00000483851 CCDC68Q9H2F9 335 aa26.16■■□□□ 1.78
SHOX2-204ENST00000483851 LTA4HP09960 611 aaKnown RBP26.15■■□□□ 1.78
SHOX2-204ENST00000483851 RALBP11234 206 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 ZDHHC20Q5W0Z9 365 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 LRRC8EQ6NSJ5 796 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 ZNF549Q6P9A3 640 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 ZYG11AQ6WRX3 759 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 C10orf107Q8IVU9 208 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 CYB5D2Q8WUJ1 264 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 S1PR5Q9H228 398 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 MRPL46Q9H2W6 279 aaKnown RBP26.15■■□□□ 1.78
SHOX2-204ENST00000483851 BPIFA1Q9NP55 256 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 PLA2G4CQ9UP65 541 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 TSPAN11A1L157 253 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 TARM1B6A8C7 271 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 BNIP3LO60238 219 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 UNC5CO95185 931 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 MYL2P10916 166 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 KCNA4P22459 653 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 KCNJ2P63252 427 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 ZRANB3Q5FWF4 1079 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 FSTL5Q8N475 847 aaPredicted RBP26.15■■□□□ 1.78
SHOX2-204ENST00000483851 GRIN3AQ8TCU5 1115 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 NXNL1Q96CM4 212 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 RIPOR3Q96MK2 946 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 LRRC37BQ96QE4 947 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 TTC1Q99614 292 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 HPS4Q9NQG7 708 aa26.15■■□□□ 1.78
SHOX2-204ENST00000483851 SCN8AQ9UQD0 1980 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 TRIM13O60858 407 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 UGT2B4P06133 528 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 GMPRP36959 345 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 PTGER3P43115 390 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 CDKN2DP55273 166 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 ZNF460Q14592 562 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 SETDB1Q15047 1291 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 PTPRRQ15256 657 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 LYPLAL1Q5VWZ2 237 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 TNS4Q8IZW8 715 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 CHST14Q8NCH0 376 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 ELSPBP1Q96BH3 223 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 ZFYVE19Q96K21 471 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 IGSF5Q9NSI5 407 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 OXSMQ9NWU1 459 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 CLEC1BQ9P126 229 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 DKK3Q9UBP4 350 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 WASF2Q9Y6W5 498 aa26.14■■□□□ 1.78
SHOX2-204ENST00000483851 DOCK8Q8NF50 2099 aa26.14■■□□□ 1.77
SHOX2-204ENST00000483851 TTC34A8MYJ7 566 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 RBP1P09455 135 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 ASPHQ12797 758 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 RIPK1Q13546 671 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 ACAP2Q15057 778 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 PSAPL1Q6NUJ1 521 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 CRTC1Q6UUV9 634 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 CRLF3Q8IUI8 442 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 YAF2Q8IY57 180 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 ERP27Q96DN0 273 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 SCYL1Q96KG9 808 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 SIKE1Q9BRV8 207 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 BRD9Q9H8M2 597 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms