RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 HEATR4Q86WZ0 1026 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 BLOC1S5Q8TDH9 187 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 CDC6Q99741 560 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 TBL1YQ9BQ87 522 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 APOL2Q9BQE5 337 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 SLC13A1Q9BZW2 595 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 LRRC40Q9H9A6 602 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 FEZ2Q9UHY8 353 aaPredicted RBP20.84■□□□□ 0.93
SEC13-217ENST00000482647 KLF15Q9UIH9 416 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 NEMP2A6NFY4 417 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 TNFRSF10CO14798 259 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 AURKAO14965 403 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 CBFA2T3O75081 653 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 PIAS2O75928 621 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 KCNA4P22459 653 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 HMGCLP35914 325 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 FDFT1P37268 417 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 SRP54P61011 504 aaKnown RBP20.83■□□□□ 0.93
SEC13-217ENST00000482647 CDK3Q00526 305 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 SPARCL1Q14515 664 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 PPM1JQ5JR12 505 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 KCTD11Q693B1 232 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 C4orf22Q6V702 233 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 KANSL1Q7Z3B3 1105 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 PHACTR4Q8IZ21 702 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 SLC25A45Q8N413 288 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 TAB3Q8N5C8 712 aaPredicted RBP20.83■□□□□ 0.93
SEC13-217ENST00000482647 PDCD7Q8N8D1 485 aaKnown RBP20.83■□□□□ 0.93
SEC13-217ENST00000482647 OR56A4Q8NGH8 313 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 WDR24Q96S15 920 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 LGR4Q9BXB1 951 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 AP1M1Q9BXS5 423 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 PAK5Q9P286 719 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 SPASTQ9UBP0 616 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 KLQ9UEF7 1012 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 BTBD3Q9Y2F9 522 aa20.83■□□□□ 0.93
SEC13-217ENST00000482647 TMEM202A6NGA9 273 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 ERI2A8K979 691 aaKnown RBP20.82■□□□□ 0.92
SEC13-217ENST00000482647 RASGRP1O95267 797 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 AP2A1O95782 977 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 ETS1P14921 441 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 KCNJ1P48048 391 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 HK3P52790 923 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 DCDC1P59894 354 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 TRIP6Q15654 476 aaKnown RBP20.82■□□□□ 0.92
SEC13-217ENST00000482647 ALG11Q2TAA5 492 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 RD3Q7Z3Z2 195 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 GLT6D1Q7Z4J2 308 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 HID1Q8IV36 788 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 EID2Q8N6I1 236 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 TSACCQ96A04 125 aaPredicted RBP20.82■□□□□ 0.92
SEC13-217ENST00000482647 MAGOHBQ96A72 148 aaKnown RBP20.82■□□□□ 0.92
SEC13-217ENST00000482647 HIC2Q96JB3 615 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 AGAP2Q99490 1192 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 NAPGQ99747 312 aaPredicted RBP20.82■□□□□ 0.92
SEC13-217ENST00000482647 ETNK1Q9HBU6 452 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 ARNT2Q9HBZ2 717 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 UCKL1Q9NWZ5 548 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 APOBEC3BQ9UH17 382 aaKnown RBP20.82■□□□□ 0.92
SEC13-217ENST00000482647 PNMA8BQ9ULN7 279 aaPredicted RBP20.82■□□□□ 0.92
SEC13-217ENST00000482647 CSNK1G3Q9Y6M4 447 aa20.82■□□□□ 0.92
SEC13-217ENST00000482647 GOLGA6L10A0A0M3HER8 536 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 CTAGE9A4FU28 777 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 E7EVH7 732 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 USP12O75317 370 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 SOD1P00441 154 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 TNFP01375 233 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 LMAN1P49257 510 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 OLIG2Q13516 323 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 HS1BP3Q53T59 392 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 PRRT3Q5FWE3 981 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 HENMT1Q5T8I9 393 aaKnown RBP20.81■□□□□ 0.92
SEC13-217ENST00000482647 ZDHHC20Q5W0Z9 365 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 PAPD7Q5XG87 772 aaKnown RBP20.81■□□□□ 0.92
SEC13-217ENST00000482647 LINC00523Q86TU6 105 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 TTC30BQ8N4P2 665 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 ZNF548Q8NEK5 533 aaPredicted RBP20.81■□□□□ 0.92
SEC13-217ENST00000482647 LMX1AQ8TE12 382 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 TBATAQ96M53 351 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 RAB6BQ9NRW1 208 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 NFKBIL1Q9UBC1 381 aaPredicted RBP20.81■□□□□ 0.92
SEC13-217ENST00000482647 PKP3Q9Y446 797 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 DGKBQ9Y6T7 804 aa20.81■□□□□ 0.92
SEC13-217ENST00000482647 CNOT1A5YKK6 2376 aaKnown RBP20.81■□□□□ 0.92
SEC13-217ENST00000482647 LRRK1Q38SD2 2015 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 C2orf81A6NN90 581 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 GIPC1O14908 333 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 SCAMP1O15126 338 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 ZNF185O15231 689 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 AQP9O43315 295 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 PPFIA2O75334 1257 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 ZSCAN5DPP0CG00 497 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 CTSEP14091 401 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 BPIP17213 487 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 RPL22P35268 128 aaKnown RBP20.8■□□□□ 0.92
SEC13-217ENST00000482647 ALS2CLQ60I27 953 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 DENND5AQ6IQ26 1287 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 ERMP1Q7Z2K6 904 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 PRUNE1Q86TP1 453 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 RBFAQ8N0V3 343 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms