RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 MT-ND5P03915 603 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 SP9P0CG40 484 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 KRT13P13646 458 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 TYRP14679 529 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 HLA-DPA1P20036 260 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 TBXAS1P24557 533 aaPredicted RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 DPP6P42658 865 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 BRCC3P46736 316 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 MCM2P49736 904 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 RAD23AP54725 363 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 PEX3P56589 373 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 STARD6P59095 220 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 CDK17Q00537 523 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 ROM1Q03395 351 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 ST3GAL1Q11201 340 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 HNRNPA0Q13151 305 aaKnown RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 MYBPC3Q14896 1274 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 KYNUQ16719 465 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 UPP1Q16831 310 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 ANKDD1AQ495B1 522 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 ATPAF1Q5TC12 328 aaPredicted RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 KRT79Q5XKE5 535 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 ARL6IP4Q66PJ3 421 aaKnown RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 CCBE1Q6UXH8 406 aaPredicted RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 TPRG1Q6ZUI0 275 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 PXKQ7Z7A4 578 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 PHYKPLQ8IUZ5 450 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 LYSMD2Q8IV50 215 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 VRK3Q8IV63 474 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 CCDC117Q8IWD4 279 aaPredicted RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 KIAA2013Q8IYS2 634 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 ELMOD1Q8N336 334 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 TMCO5AQ8N6Q1 288 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 PLA2G15Q8NCC3 412 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 ITFG1Q8TB96 612 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 PPP1R10Q96QC0 940 aaKnown RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 MNTQ99583 582 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 LLPHQ9BRT6 129 aaKnown RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 TCHPQ9BT92 498 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 DNAI2Q9GZS0 605 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 CDT1Q9H211 546 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 CXCL16Q9H2A7 254 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 PDCL3Q9H2J4 239 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 PABPC3Q9H361 631 aaKnown RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 LTB4R2Q9NPC1 389 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 INTS10Q9NVR2 710 aaKnown RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 PNPOQ9NVS9 261 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 HCFC1R1Q9NWW0 138 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 ADPRHL2Q9NX46 363 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 DLGAP2Q9P1A6 1054 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 NCDNQ9UBB6 729 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 DNMT3BQ9UBC3 853 aaKnown RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 CHORDC1Q9UHD1 332 aaPredicted RBP6.73□□□□□ -1.33
CLK1-212ENST00000482590 TNFSF13BQ9Y275 285 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 DTNAQ9Y4J8 743 aa6.73□□□□□ -1.33
CLK1-212ENST00000482590 ANAPC1Q9H1A4 1944 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 MYH10P35580 1976 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 SMIM28A0A1B0GU29 152 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 WDR27A2RRH5 827 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 E9PMD0 336 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 H7C4K7 107 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 PES1O00541 588 aaKnown RBP6.72□□□□□ -1.33
CLK1-212ENST00000482590 SYN3O14994 580 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 ECI2O75521 394 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 RHOP08100 348 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 VSIG10L2P0DP72 767 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 MCF2P10911 925 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 SFTPCP11686 197 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 CEBPBP17676 345 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 PTPN2P17706 415 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 NR4A1P22736 598 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 GABRB3P28472 473 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 MATR3P43243 847 aaKnown RBP eCLIP6.72□□□□□ -1.33
CLK1-212ENST00000482590 ZNF41P51814 821 aaPredicted RBP6.72□□□□□ -1.33
CLK1-212ENST00000482590 ARPP19P56211 112 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 POLR2FP61218 127 aaKnown RBP6.72□□□□□ -1.33
CLK1-212ENST00000482590 RPS16P62249 146 aaKnown RBP6.72□□□□□ -1.33
CLK1-212ENST00000482590 SPIDRQ14159 915 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 TRIM25Q14258 630 aaKnown RBP6.72□□□□□ -1.33
CLK1-212ENST00000482590 ADRM1Q16186 407 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 ZNF674Q2M3X9 581 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 SLC44A4Q53GD3 710 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 KDELC1Q6UW63 502 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 DGLUCYQ7Z3D6 616 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 ANKS1BQ7Z6G8 1248 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 CPLX4Q7Z7G2 160 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 GATAD2AQ86YP4 633 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 TBC1D21Q8IYX1 336 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 TAGAPQ8N103 731 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 ZNF276Q8N554 614 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 FBXO18Q8NFZ0 1043 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 OR6Y1Q8NGX8 325 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 DNASE1L2Q92874 299 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 PTP4A1Q93096 173 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 MCRS1Q96EZ8 462 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 ZNF764Q96H86 408 aaPredicted RBP6.72□□□□□ -1.33
CLK1-212ENST00000482590 MRGPRX1Q96LB2 322 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 REEP2Q9BRK0 252 aa6.72□□□□□ -1.33
CLK1-212ENST00000482590 RPP25Q9BUL9 199 aaKnown RBP6.72□□□□□ -1.33
CLK1-212ENST00000482590 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms