RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 HK2P52789 917 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 PPIGQ13427 754 aaKnown RBP eCLIP18.39■□□□□ 0.542e-6■■■□□ 15.7
MRPL28-209ENST00000481453 LAMB3Q13751 1172 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 SEMA3AQ14563 771 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 THEMIS2Q5TEJ8 643 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 CCDC149Q6ZUS6 474 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 HTR3DQ70Z44 454 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 UBE2Q1Q7Z7E8 422 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 KBTBD6Q86V97 674 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 BBS7Q8IWZ6 715 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 BHMTQ93088 406 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 TCF25Q9BQ70 676 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 ZBED2Q9BTP6 218 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 IGSF5Q9NSI5 407 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 ZDHHC2Q9UIJ5 367 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 ARIH1Q9Y4X5 557 aaPredicted RBP18.39■□□□□ 0.54
MRPL28-209ENST00000481453 PCDHGC4Q9Y5F7 938 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 RAI2Q9Y5P3 530 aa18.39■□□□□ 0.54
MRPL28-209ENST00000481453 HIDE1A8MVS5 230 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 AQP4P55087 323 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 XIAPP98170 497 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 TRAF2Q12933 501 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 PPM1LQ5SGD2 360 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 TMEM240Q5SV17 173 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 HECTD2Q5U5R9 776 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 SLC30A9Q6PML9 568 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 C16orf89Q6UX73 402 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 DNAJC5GQ8N7S2 189 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 TTC16Q8NEE8 873 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 MDGA1Q8NFP4 955 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 GPR150Q8NGU9 434 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 GABPB2Q8TAK5 448 aaPredicted RBP18.39■□□□□ 0.53
MRPL28-209ENST00000481453 SERPINI1Q99574 410 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 PAPOLBQ9NRJ5 636 aaKnown RBP18.39■□□□□ 0.53
MRPL28-209ENST00000481453 XPR1Q9UBH6 696 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 VPS28Q9UK41 221 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 PACSIN3Q9UKS6 424 aa18.39■□□□□ 0.53
MRPL28-209ENST00000481453 GRID2O43424 1007 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CSPG5O95196 566 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 PSMA3P25788 255 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CCR2P41597 374 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 LBX1P52954 281 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 MED21Q13503 144 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CDH18Q13634 790 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CYLC2Q14093 348 aaPredicted RBP18.38■□□□□ 0.53
MRPL28-209ENST00000481453 NXNQ6DKJ4 435 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 NCEH1Q6PIU2 408 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 KYQ8NBH2 561 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 RP9Q8TA86 221 aaKnown RBP18.38■□□□□ 0.53
MRPL28-209ENST00000481453 SH3RF2Q8TEC5 729 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 SLC46A2Q9BY10 475 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 UNKQ9C0B0 810 aaKnown RBP18.38■□□□□ 0.53
MRPL28-209ENST00000481453 FAM192AQ9GZU8 254 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 VTI1BQ9UEU0 232 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CLEC4EQ9ULY5 219 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 PRPF19Q9UMS4 504 aaKnown RBP18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CDYLQ9Y232 598 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 IRAK3Q9Y616 596 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 SLCO1B7G3V0H7 640 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 H3BNX3 289 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CCL16O15467 120 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 UQCRBP14927 111 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 PPARGP37231 505 aaPredicted RBP18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CDKN2DP55273 166 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 FPGSQ05932 587 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 INO80DQ53TQ3 878 aaPredicted RBP18.38■□□□□ 0.53
MRPL28-209ENST00000481453 DSELQ8IZU8 1212 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 APCDD1Q8J025 514 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CPXM2Q8N436 756 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 DCAF4L2Q8NA75 395 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 HEXDCQ8WVB3 486 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 RMDN1Q96DB5 314 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 CORO1BQ9BR76 489 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 NLE1Q9NVX2 485 aaPredicted RBP18.38■□□□□ 0.53
MRPL28-209ENST00000481453 HCFC1R1Q9NWW0 138 aa18.38■□□□□ 0.53
MRPL28-209ENST00000481453 LSM7Q9UK45 103 aaKnown RBP18.38■□□□□ 0.53
MRPL28-209ENST00000481453 MTF2Q9Y483 593 aaPredicted RBP18.38■□□□□ 0.53
MRPL28-209ENST00000481453 HELZP42694 1942 aaKnown RBP18.37■□□□□ 0.53
MRPL28-209ENST00000481453 DOCK6Q96HP0 2047 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 TRAV19A0A0A6YYK7 116 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 TYW5A2RUC4 315 aaKnown RBP18.37■□□□□ 0.53
MRPL28-209ENST00000481453 CD3EAPO15446 510 aaKnown RBP18.37■□□□□ 0.53
MRPL28-209ENST00000481453 MT-CO1P00395 513 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 ZNF549Q6P9A3 640 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 SDCCAG8Q86SQ7 713 aaPredicted RBP18.37■□□□□ 0.53
MRPL28-209ENST00000481453 MFN1Q8IWA4 741 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 LPCAT1Q8NF37 534 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 CDKN2AIPNLQ96HQ2 116 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 CATSPER2Q96P56 530 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 TMEM106CQ9BVX2 250 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 FCF1Q9Y324 198 aaKnown RBP18.37■□□□□ 0.53
MRPL28-209ENST00000481453 LAMA2P24043 3122 aaKnown RBP18.37■□□□□ 0.53
MRPL28-209ENST00000481453 DLX3O60479 287 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 GLP2RO95838 553 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 GLUD1P00367 558 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 PRSS56P0CW18 603 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 SLC12A2P55011 1212 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 TAF1AQ15573 450 aaPredicted RBP18.37■□□□□ 0.53
MRPL28-209ENST00000481453 GRAMD1BQ3KR37 738 aa18.37■□□□□ 0.53
MRPL28-209ENST00000481453 PLPP4Q5VZY2 271 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms