RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CCDC157Q569K6 752 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 CT47A1Q5JQC4 288 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 PIP5KL1Q5T9C9 394 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 RETSATQ6NUM9 610 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 GJB7Q6PEY0 223 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ETV3LQ6ZN32 361 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 FAM183BPQ6ZVS7 135 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ERN2Q76MJ5 926 aaKnown RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ABI3BPQ7Z7G0 1075 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 HORMAD1Q86X24 394 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ERICH1Q86X53 443 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 CIR1Q86X95 450 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 FAM71AQ8IYT1 594 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ZNF683Q8IZ20 524 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 LSMEM2Q8N112 164 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 DCBLD1Q8N8Z6 715 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ATP11CQ8NB49 1132 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 MSANTD4Q8NCY6 345 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 OR52K2Q8NGK3 314 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 OR2A12Q8NGT7 310 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 OR4C6Q8NH72 309 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ASB12Q8WXK4 309 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 FGF11Q92914 225 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 GRAMD1AQ96CP6 724 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 C18orf8Q96DM3 657 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 RCC1LQ96I51 464 aaKnown RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 LRIG1Q96JA1 1093 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 FEM1CQ96JP0 617 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 TKTL2Q9H0I9 626 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 SIK2Q9H0K1 926 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 PCDH18Q9HCL0 1135 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ACP6Q9NPH0 428 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 METTL5Q9NRN9 209 aaKnown RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 PIGVQ9NUD9 493 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 NCKIPSDQ9NZQ3 722 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 COX16Q9P0S2 106 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 PPARGC1AQ9UBK2 798 aaKnown RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 IL36AQ9UHA7 158 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 VPS51Q9UID3 782 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 DNAJC12Q9UKB3 198 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 CLCA2Q9UQC9 943 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 BPTFQ12830 3046 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ANKRD36A6QL64 1941 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 A0A1W2PQU0 124 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 CAPN8A6NHC0 703 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 CBX4O00257 560 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 KPNA3O00505 521 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-216ENST00000481048 TOR1BO14657 336 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 SCAMP1O15126 338 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 SLC31A1O15431 190 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 AP1G1O43747 822 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 PIAS2O75928 621 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 CNTN5O94779 1100 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ENDOD1O94919 500 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 PCDH8O95206 1070 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ADCY5O95622 1261 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 MT-CO1P00395 513 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 MT-CO3P00414 261 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ERBB2P04626 1255 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 CTSLP07711 333 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 CKMT1AP12532 417 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ZNF16P17020 682 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ERCC5P28715 1186 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-216ENST00000481048 NEK3P51956 506 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 METAP1P53582 386 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 GEMIN4P57678 1058 aaKnown RBP6.56□□□□□ -1.36
LRCH3-216ENST00000481048 RPS21P63220 83 aaKnown RBP6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ZNF284Q2VY69 593 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 KIAA1161Q6NSJ0 714 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 CD300LDQ6UXZ3 194 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 BNIPLQ7Z465 357 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 C14orf80Q86SX3 495 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 STK32CQ86UX6 486 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 SLC47A2Q86VL8 602 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ZNF677Q86XU0 584 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 MARCH9Q86YJ5 346 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 PASD1Q8IV76 773 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 LGI4Q8N135 537 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 SLC25A45Q8N413 288 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 FAM26EQ8N5C1 309 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 PCDH20Q8N6Y1 951 aaKnown RBP6.56□□□□□ -1.36
LRCH3-216ENST00000481048 KYQ8NBH2 561 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 KLHL6Q8WZ60 621 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 RAB7BQ96AH8 199 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ISG20Q96AZ6 181 aaKnown RBP6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ARHGEF26Q96DR7 871 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 ZNF578Q96N58 590 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-216ENST00000481048 LENG8Q96PV6 779 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-216ENST00000481048 PSMB7Q99436 277 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 HEPHQ9BQS7 1158 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 C1QTNF3Q9BXJ4 246 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 SLC17A9Q9BYT1 436 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 PDCL3Q9H2J4 239 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 NDST4Q9H3R1 872 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 SIX2Q9NPC8 291 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 NLGN3Q9NZ94 848 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 DAAM1Q9Y4D1 1078 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 CSNK1G3Q9Y6M4 447 aa6.56□□□□□ -1.36
LRCH3-216ENST00000481048 NBEAQ8NFP9 2946 aa6.55□□□□□ -1.36
LRCH3-216ENST00000481048 SPTA1P02549 2419 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms